RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ABI3BPQ7Z7G0 1075 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 NLRP8Q86W28 1048 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 GPR26Q8NDV2 337 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 PPHLN1Q8NEY8 458 aaKnown RBP15.95■□□□□ 0.14
CLN6-216ENST00000636876 OR4K2Q8NGD2 314 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 SEC14L1Q92503 715 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 SCAMP4Q969E2 229 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 AP2M1Q96CW1 435 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 C19orf43Q9BQ61 176 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 HINFPQ9BQA5 517 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 FAM83DQ9H4H8 585 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 TMEM74BQ9NUR3 256 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 SYBUQ9NX95 663 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 DMGDHQ9UI17 866 aaKnown RBP15.95■□□□□ 0.14
CLN6-216ENST00000636876 TCAF1Q9Y4C2 921 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 PI4KAP42356 2102 aa15.95■□□□□ 0.14
CLN6-216ENST00000636876 A0A1B0GTW7 788 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 A0A1W2PR77 199 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 POM121BA6NF01 834 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 PRR5-ARHGAP8B1AHC4 643 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 LMNAP02545 664 aaKnown RBP15.94■□□□□ 0.14
CLN6-216ENST00000636876 PCCBP05166 539 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 RETP07949 1114 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 GNSP15586 552 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 PSMA3P25788 255 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 GUCY2DQ02846 1103 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 PTPRCAPQ14761 206 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 STAT4Q14765 748 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 TSTD2Q5T7W7 516 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 HENMT1Q5T8I9 393 aaKnown RBP15.94■□□□□ 0.14
CLN6-216ENST00000636876 ARMC3Q5W041 872 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 ZDHHC20Q5W0Z9 365 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 KYAT3Q6YP21 454 aaKnown RBP15.94■□□□□ 0.14
CLN6-216ENST00000636876 RABEPKQ7Z6M1 372 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 PELI3Q8N2H9 469 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 PLA2G15Q8NCC3 412 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 OR13C4Q8NGS5 318 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 STYXQ8WUJ0 223 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 PTCD2Q8WV60 388 aaKnown RBP15.94■□□□□ 0.14
CLN6-216ENST00000636876 DNAJC1Q96KC8 554 aaKnown RBP15.94■□□□□ 0.14
CLN6-216ENST00000636876 BMFQ96LC9 184 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 PLEKHG4BQ96PX9 1271 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 RIOK2Q9BVS4 552 aaKnown RBP15.94■□□□□ 0.14
CLN6-216ENST00000636876 NLE1Q9NVX2 485 aaPredicted RBP15.94■□□□□ 0.14
CLN6-216ENST00000636876 RIMKLBQ9ULI2 386 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 ZNF292O60281 2723 aa15.94■□□□□ 0.14
CLN6-216ENST00000636876 ESYT3A0FGR9 886 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 CCDC78A2IDD5 438 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 SDR42E2A6NKP2 422 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 A6NNZ2 444 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 H0Y8X5 98 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 K7ESM1 405 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 TSHRP16473 764 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 TEAD1P28347 426 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 CD38P28907 300 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 SPAM1P38567 509 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 MPLP40238 635 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 AFF3P51826 1226 aaKnown RBP15.93■□□□□ 0.14
CLN6-216ENST00000636876 ARL4CP56559 192 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 PFN3P60673 137 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 CAV1Q03135 178 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 INPP5AQ14642 412 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 TRADDQ15628 312 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 HIF1AQ16665 826 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 DUOXA1Q1HG43 343 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 DNAJC21Q5F1R6 531 aaKnown RBP15.93■□□□□ 0.14
CLN6-216ENST00000636876 FNBP1LQ5T0N5 605 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 ALS2CLQ60I27 953 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 RAET1GQ6H3X3 334 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 PNCKQ6P2M8 343 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 KDM7AQ6ZMT4 941 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 NLRP9Q7RTR0 991 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 IQCHQ86VS3 1027 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 AGGF1Q8N302 714 aaeCLIP15.93■□□□□ 0.14
CLN6-216ENST00000636876 MPP5Q8N3R9 675 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 MFSD2AQ8NA29 543 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 CEP76Q8TAP6 659 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 FAM174AQ8TBP5 190 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 ART4Q93070 314 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 SIGLEC10Q96LC7 697 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 PWWP2AQ96N64 755 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 KIFC1Q9BW19 673 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 ARRDC1-AS1Q9H2J1 176 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 MRM3Q9HC36 420 aaKnown RBP15.93■□□□□ 0.14
CLN6-216ENST00000636876 EPB41L5Q9HCM4 733 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 IL26Q9NPH9 171 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 SAMD15Q9P1V8 674 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 FKBPLQ9UIM3 349 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 GMEB2Q9UKD1 530 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 SOX13Q9UN79 622 aa15.93■□□□□ 0.14
CLN6-216ENST00000636876 GAPDHSO14556 408 aaPredicted RBP15.92■□□□□ 0.14
CLN6-216ENST00000636876 TOR1BO14657 336 aa15.92■□□□□ 0.14
CLN6-216ENST00000636876 VILLO15195 856 aa15.92■□□□□ 0.14
CLN6-216ENST00000636876 SLU7O95391 586 aaKnown RBP15.92■□□□□ 0.14
CLN6-216ENST00000636876 SOD1P00441 154 aa15.92■□□□□ 0.14
CLN6-216ENST00000636876 WNT1P04628 370 aa15.92■□□□□ 0.14
CLN6-216ENST00000636876 TRIM23P36406 574 aa15.92■□□□□ 0.14
CLN6-216ENST00000636876 HADHAP40939 763 aa15.92■□□□□ 0.14
CLN6-216ENST00000636876 GPR1P46091 355 aa15.92■□□□□ 0.14
CLN6-216ENST00000636876 RABIFP47224 123 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms