RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 NAT6Q93015 286 aa18.35■□□□□ 0.53
CLN6-214ENST00000636314 LGR4Q9BXB1 951 aa18.35■□□□□ 0.53
CLN6-214ENST00000636314 CEP41Q9BYV8 373 aa18.35■□□□□ 0.53
CLN6-214ENST00000636314 PCDH9Q9HC56 1237 aa18.35■□□□□ 0.53
CLN6-214ENST00000636314 MRPL40Q9NQ50 206 aaKnown RBP18.35■□□□□ 0.53
CLN6-214ENST00000636314 THSD1Q9NS62 852 aa18.35■□□□□ 0.53
CLN6-214ENST00000636314 SEPT10Q9P0V9 454 aa18.35■□□□□ 0.53
CLN6-214ENST00000636314 MOSPD1Q9UJG1 213 aa18.35■□□□□ 0.53
CLN6-214ENST00000636314 KIF26BQ2KJY2 2108 aa18.35■□□□□ 0.53
CLN6-214ENST00000636314 A0A0U1RQS6 177 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 TNFRSF10CO14798 259 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 NDUFA10O95299 355 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 CDKN2BP42772 138 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 RPL26P61254 145 aaKnown RBP18.34■□□□□ 0.53
CLN6-214ENST00000636314 LY6DQ14210 128 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 KAZNQ674X7 775 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 LVRNQ6Q4G3 990 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 CRTC1Q6UUV9 634 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 SPOCD1Q6ZMY3 1216 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 GAS2L3Q86XJ1 694 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 CBARPQ8N350 705 aaPredicted RBP18.34■□□□□ 0.53
CLN6-214ENST00000636314 CNTD1Q8N815 330 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 ARL10Q8N8L6 244 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 WBP1Q96G27 269 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 SMIM14Q96QK8 99 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 RBM15Q96T37 977 aaKnown RBP eCLIP18.34■□□□□ 0.53
CLN6-214ENST00000636314 DPH1Q9BZG8 443 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 SEMA4CQ9C0C4 833 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 BRD8Q9H0E9 1235 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 CYP4F12Q9HCS2 524 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 ASCL3Q9NQ33 180 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 SIRPGQ9P1W8 387 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 RPL26L1Q9UNX3 145 aaKnown RBP18.34■□□□□ 0.53
CLN6-214ENST00000636314 SATB2Q9UPW6 733 aa18.34■□□□□ 0.53
CLN6-214ENST00000636314 EPN1Q9Y6I3 576 aaPredicted RBP18.34■□□□□ 0.53
CLN6-214ENST00000636314 PRSS38A1L453 326 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 PRLP01236 227 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 FECHP22830 423 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 RBMS1P29558 406 aaKnown RBP18.33■□□□□ 0.52
CLN6-214ENST00000636314 SKOR1P84550 965 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 CDK3Q00526 305 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 VAC14Q08AM6 782 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 BZW1Q7L1Q6 419 aaKnown RBP18.33■□□□□ 0.52
CLN6-214ENST00000636314 TECPR1Q7Z6L1 1165 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 DAAM2Q86T65 1068 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 CCDC50Q8IVM0 306 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 KATNAL2Q8IYT4 538 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 KYQ8NBH2 561 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 AGAP3Q96P47 875 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 TEX101Q9BY14 249 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 GULP1Q9UBP9 304 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 CD84Q9UIB8 345 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 PADI4Q9UM07 663 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 GPR34Q9UPC5 381 aa18.33■□□□□ 0.52
CLN6-214ENST00000636314 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.33■□□□□ 0.52
CLN6-214ENST00000636314 CST8O60676 142 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 MMP2P08253 660 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 TGM2P21980 687 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 TEAD1P28347 426 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 GPR1P46091 355 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 MARCKSL1P49006 195 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 NR2C2P49116 596 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 STC1P52823 247 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 DPTQ07507 201 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 LLGL1Q15334 1064 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 TAZQ16635 292 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 ISXQ2M1V0 245 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 TFDP3Q5H9I0 405 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 PERM1Q5SV97 790 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 TAF8Q7Z7C8 310 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 AP2M1Q96CW1 435 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 RBM41Q96IZ5 413 aaKnown RBP18.32■□□□□ 0.52
CLN6-214ENST00000636314 ADGRE3Q9BY15 652 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 SUDS3Q9H7L9 328 aaPredicted RBP18.32■□□□□ 0.52
CLN6-214ENST00000636314 CARS2Q9HA77 564 aaKnown RBP18.32■□□□□ 0.52
CLN6-214ENST00000636314 RP1P56715 2156 aa18.32■□□□□ 0.52
CLN6-214ENST00000636314 C1orf232A0A0U1RR37 186 aa18.31■□□□□ 0.52
CLN6-214ENST00000636314 ZRANB2O95218 330 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLN6-214ENST00000636314 PECAM1P16284 738 aaPredicted RBP18.31■□□□□ 0.52
CLN6-214ENST00000636314 PTSQ03393 145 aa18.31■□□□□ 0.52
CLN6-214ENST00000636314 PRKD1Q15139 912 aaPredicted RBP18.31■□□□□ 0.52
CLN6-214ENST00000636314 FOXR1Q6PIV2 292 aa18.31■□□□□ 0.52
CLN6-214ENST00000636314 RFLNAQ6ZTI6 216 aa18.31■□□□□ 0.52
CLN6-214ENST00000636314 B4GALNT4Q76KP1 1039 aa18.31■□□□□ 0.52
CLN6-214ENST00000636314 ZNF765Q7L2R6 523 aa18.31■□□□□ 0.52
CLN6-214ENST00000636314 NT5DC3Q86UY8 548 aa18.31■□□□□ 0.52
CLN6-214ENST00000636314 TFB1MQ8WVM0 346 aaKnown RBP18.31■□□□□ 0.52
CLN6-214ENST00000636314 ATXN7L3BQ96GX2 97 aa18.31■□□□□ 0.52
CLN6-214ENST00000636314 LYSMD1Q96S90 227 aa18.31■□□□□ 0.52
CLN6-214ENST00000636314 FRMD8Q9BZ67 464 aaPredicted RBP18.31■□□□□ 0.52
CLN6-214ENST00000636314 TMEM168Q9H0V1 697 aa18.31■□□□□ 0.52
CLN6-214ENST00000636314 ABCG8Q9H221 673 aa18.31■□□□□ 0.52
CLN6-214ENST00000636314 SYNDIG1Q9H7V2 258 aa18.31■□□□□ 0.52
CLN6-214ENST00000636314 SAE1Q9UBE0 346 aaPredicted RBP18.31■□□□□ 0.52
CLN6-214ENST00000636314 hCG_1818297A0A087WSY0 165 aa18.3■□□□□ 0.52
CLN6-214ENST00000636314 PYCARD-AS1I3L0S3 204 aa18.3■□□□□ 0.52
CLN6-214ENST00000636314 CLDN7O95471 211 aa18.3■□□□□ 0.52
CLN6-214ENST00000636314 PYGLP06737 847 aa18.3■□□□□ 0.52
CLN6-214ENST00000636314 NAP1L1P55209 391 aaKnown RBP18.3■□□□□ 0.52
CLN6-214ENST00000636314 GALNT3Q14435 633 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms