RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 TMEM2Q9UHN6 1383 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 TEX13CA0A0J9YWL9 993 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 C17orf113A0A1B0GUU1 675 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 PABPN1LA6NDY0 278 aaKnown RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 TNPO2O14787 897 aaKnown RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 BCAT2O15382 392 aaPredicted RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 LDB2O43679 373 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 XPNPEP2O43895 674 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 HNRNPCL1O60812 293 aaKnown RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 KCNJ13O60928 360 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 FAM155BO75949 473 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 CLDN7O95471 211 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 SERPINC1P01008 464 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 GALTP07902 379 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 CHRM4P08173 479 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 HNRNPA1P09651 372 aaKnown RBP eCLIP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 MYZAPP0CAP1 466 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 PCNAP12004 261 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 HSD3B1P14060 373 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 ZNF8P17098 575 aaPredicted RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 AMD1P17707 334 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 GJC1P36383 396 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 THPOP40225 353 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 LIFRP42702 1097 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 MTNR1AP48039 350 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 CTCFP49711 727 aaPredicted RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 PEX5P50542 639 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 NUDT6P53370 316 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 SELENOVP59797 346 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 ZP1P60852 638 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 EFNB1P98172 346 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 SORDQ00796 357 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 ARL16Q0P5N6 197 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 TRAF2Q12933 501 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 FOXD4Q12950 439 aaPredicted RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 NEDD9Q14511 834 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 TDRD12Q587J7 1177 aaKnown RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 HSP90AB4PQ58FF6 505 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 DCAF6Q58WW2 860 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 XKR9Q5GH70 373 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 WDR45BQ5MNZ6 344 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 VWA5B1Q5TIE3 1220 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 IRAK1BP1Q5VVH5 260 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 NCAPH2Q6IBW4 605 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 LRRC8EQ6NSJ5 796 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 C8orf82Q6P1X6 216 aaPredicted RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 GJB7Q6PEY0 223 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 Q6ZSV7 163 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 LRRC8DQ7L1W4 858 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 RRM2BQ7LG56 351 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 SHFQ7M4L6 423 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 GSTA5Q7RTV2 222 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 PRSS45Q7RTY3 260 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 SH2D6Q7Z4S9 175 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 SMIM29Q86T20 159 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 TBC1D26Q86UD7 250 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 FAM160B2Q86V87 743 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 MON1AQ86VX9 555 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 TDRPQ86YL5 185 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 TMC8Q8IU68 726 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 HERC6Q8IVU3 1022 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 KLHDC8BQ8IXV7 354 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 MB21D2Q8IYB1 491 aaPredicted RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 CCDC105Q8IYK2 499 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 NKAPQ8N5F7 415 aaKnown RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 PARP16Q8N5Y8 322 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 EXD3Q8N9H8 876 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 IL17RCQ8NAC3 791 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 USP38Q8NB14 1042 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 KDM1BQ8NB78 822 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 SETD9Q8NE22 299 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 RFWD2Q8NHY2 731 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 SPPL3Q8TCT6 385 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 NEK9Q8TD19 979 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 GPT2Q8TD30 523 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 TMEM18Q96B42 140 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 GCC1Q96CN9 775 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 APOPT1Q96IL0 206 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 UBXN10Q96LJ8 280 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 PGLYRP2Q96PD5 576 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 UHRF2Q96PU4 802 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 NPAS1Q99742 590 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 KXD1Q9BQD3 176 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 EIF2AK1Q9BQI3 630 aaKnown RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 ISCA1Q9BUE6 129 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 HEMGNQ9BXL5 484 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 GPR63Q9BZJ6 419 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 INTS2Q9H0H0 1204 aaKnown RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 LMAN2LQ9H0V9 348 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 PDCL3Q9H2J4 239 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 TAOK3Q9H2K8 898 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 MVB12BQ9H7P6 319 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 WDR6Q9NNW5 1121 aaKnown RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 BPIFA1Q9NP55 256 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 ATP8A2Q9NTI2 1148 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 TMEM51Q9NW97 253 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 IRAK4Q9NWZ3 460 aa1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 CISD1Q9NZ45 108 aaKnown RBP1.14□□□□□ -2.23
SMARCB1-209ENST00000635578 OR6C3Q9NZP0 311 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms