RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	TEKT4	Q8WW24	435 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	TTC9	Q92623	222 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	DTD2	Q96FN9	168 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	COQ10A	Q96MF6	247 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	ARHGAP9	Q9BRR9	750 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	TEX101	Q9BY14	249 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	CDH19	Q9H159	772 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	PCDH18	Q9HCL0	1135 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	NT5M	Q9NPB1	228 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	ETNK2	Q9NVF9	386 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	TMEM63C	Q9P1W3	806 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	BZW2	Q9Y6E2	419 aa	Known RBP	10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	SCN8A	Q9UQD0	1980 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	PRAMEF33	A0A0G2JMD5	474 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	NPIPB15	A6NHN6	443 aa	Predicted RBP	10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247		J3QKU1	62 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	NVL	O15381	856 aa	Known RBP	10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	PRAMEF10	O60809	474 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	PGLS	O95336	258 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	RARA	P10276	462 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	CTPS1	P17812	591 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	GM2A	P17900	193 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	ITIH1	P19827	911 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	CR2	P20023	1033 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	LHCGR	P22888	699 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	ALDH4A1	P30038	563 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	GJC1	P36383	396 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	GPR1	P46091	355 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	MAZ	P56270	477 aa	Known RBP	10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	CDK3	Q00526	305 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	NFKBIB	Q15653	356 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	HADH	Q16836	314 aa	Known RBP	10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	CCDC122	Q5T0U0	273 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247		Q6ZVL8	140 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	HSD11B1L	Q7Z5J1	315 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	SFTPA2	Q8IWL1	248 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	PGBD5	Q8N414	524 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	ZSCAN1	Q8NBB4	408 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	GPBAR1	Q8TDU6	330 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	SGF29	Q96ES7	293 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	SCRN2	Q96FV2	425 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	MED8	Q96G25	268 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	NUP85	Q9BW27	656 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	FRMD8	Q9BZ67	464 aa	Predicted RBP	10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	POLR1E	Q9GZS1	481 aa	Known RBP	10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	THAP2	Q9H0W7	228 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	ISCU	Q9H1K1	167 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	RDH14	Q9HBH5	336 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	PRM3	Q9NNZ6	103 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	TAAR2	Q9P1P5	351 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	RCOR3	Q9P2K3	495 aa	Predicted RBP	10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	CD84	Q9UIB8	345 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	SUFU	Q9UMX1	484 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	UNC13C	Q8NB66	2214 aa		10.34	□□□□□ -0.75
UBE3A-223	ENST00000631247	COL6A6	A6NMZ7	2263 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	MYO18B	Q8IUG5	2567 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	MYO1F	O00160	1098 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	ECEL1	O95672	775 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	PEX11B	O96011	259 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	CEACAM5	P06731	702 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	TCF4	P15884	667 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	AK4	P27144	223 aa	Predicted RBP	10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	ACTR1B	P42025	376 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	OR1D5	P58170	312 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	ACTR1A	P61163	376 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	ZFP36L1	Q07352	338 aa	Known RBP	10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	TGIF1	Q15583	401 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	FIGN	Q5HY92	759 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	ZFYVE27	Q5T4F4	411 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	LRRC66	Q68CR7	880 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	TIGD7	Q6NT04	549 aa	Predicted RBP	10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	BRICD5	Q6PL45	260 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	TSPAN33	Q86UF1	283 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	GALNT13	Q8IUC8	556 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	LRRC49	Q8IUZ0	686 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	SLITRK4	Q8IW52	837 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	NIPA2	Q8N8Q9	360 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	CCDC112	Q8NEF3	446 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	USP7	Q93009	1102 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	AP2M1	Q96CW1	435 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	BTBD6	Q96KE9	485 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	NSMCE3	Q96MG7	304 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	OR2M4	Q96R27	311 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	MCCC1	Q96RQ3	725 aa	Predicted RBP	10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	SEMA3C	Q99985	751 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	SEMA4C	Q9C0C4	833 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	SEMA6C	Q9H3T2	930 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	SPATS2L	Q9NUQ6	558 aa	Known RBP	10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	ACSL6	Q9UKU0	697 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	DNPEP	Q9ULA0	475 aa		10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	HEMK1	Q9Y5R4	338 aa	Predicted RBP	10.33	□□□□□ -0.76
UBE3A-223	ENST00000631247	UBR5	O95071	2799 aa	Predicted RBP	10.32	□□□□□ -0.76
UBE3A-223	ENST00000631247	BSN	Q9UPA5	3926 aa		10.32	□□□□□ -0.76
UBE3A-223	ENST00000631247	AHCTF1	Q8WYP5	2266 aa		10.32	□□□□□ -0.76
UBE3A-223	ENST00000631247	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	10.32	□□□□□ -0.76
UBE3A-223	ENST00000631247	FAM187A	A6NFU0	413 aa		10.32	□□□□□ -0.76
UBE3A-223	ENST00000631247		B8ZZF3	427 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms