RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 INSM2Q96T92 566 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-213ENST00000630925 SSX3Q99909 188 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 SHCBP1LQ9BZQ2 653 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 GPR88Q9GZN0 384 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 LZTFL1Q9NQ48 299 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 FSCN3Q9NQT6 498 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 TDP1Q9NUW8 608 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 ETNK2Q9NVF9 386 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 KLHL28Q9NXS3 571 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 COPG2Q9UBF2 871 aa4.88□□□□□ -1.63
SDCBP-213ENST00000630925 TMEM131LA2VDJ0 1609 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 KIAA1210Q9ULL0 1709 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 A0A087WV48 116 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 A0A0U1RQS6 177 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 KRTAP9-6A0A140TA67 174 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 ZBTB42B2RXF5 422 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 B4GALT2O60909 372 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CLPXO76031 633 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PRPF6O94906 941 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 AGTP01019 485 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CTSBP07858 339 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 C8orf89P0DMQ9 161 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 VCLP18206 1134 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 TCEA1P23193 301 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CD1BP29016 333 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 NMT1P30419 496 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 SLC6A9P48067 706 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 TUFMP49411 452 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CDK7P50613 346 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RAB28P51157 221 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 GPX6P59796 221 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 UFM1P61960 85 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RELBQ01201 579 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CSTF3Q12996 717 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RAB32Q13637 225 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 DMC1Q14565 340 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 DECR1Q16698 335 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 FAM83EQ2M2I3 478 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 ASTE1Q2TB18 679 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 ZNF829Q3KNS6 432 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 FAM98BQ52LJ0 330 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PLAC9Q5JTB6 97 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RTP2Q5QGT7 225 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 DCAF12L1Q5VU92 463 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 ZNF385CQ66K41 422 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PTRHD1Q6GMV3 140 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 MRNIPQ6NTE8 343 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 LRRC70Q7Z2Q7 622 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CAMKMTQ7Z624 323 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 ASPGQ86U10 573 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 SERINC5Q86VE9 423 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 NME9Q86XW9 330 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RASAL3Q86YV0 1011 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 IRF2BP1Q8IU81 584 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 SLC15A3Q8IY34 581 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CFAP206Q8IYR0 622 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PM20D2Q8IYS1 436 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 UNC5BQ8IZJ1 945 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CCDC63Q8NA47 563 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 BPIFCQ8NFQ6 507 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RAB3IL1Q8TBN0 382 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PAQR8Q8TEZ7 354 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 ASZ1Q8WWH4 475 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 HOXB13Q92826 284 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RHBDF1Q96CC6 855 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RNF31Q96EP0 1072 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 KREMEN1Q96MU8 473 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 TRNT1Q96Q11 434 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 JAM3Q9BX67 310 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RAB17Q9H0T7 212 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 TLR8Q9NR97 1041 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 FARSBQ9NSD9 589 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PNPLA3Q9NST1 481 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PRMT7Q9NVM4 692 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 FAM118AQ9NWS6 357 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 SENP1Q9P0U3 644 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CHRNA9Q9UGM1 479 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 SLC9A8Q9Y2E8 581 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 MRPS7Q9Y2R9 242 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 RAD54BQ9Y620 910 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PFASO15067 1338 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 SOS2Q07890 1332 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 TTC21AQ8NDW8 1320 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 FMN1Q68DA7 1419 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 KIAA1107Q9UPP5 1409 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 WDR90Q96KV7 1748 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 BTBD17A6NE02 478 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 OR2W5A6NFC9 320 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 PRR23D1E9PI22 279 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 F8W810 466 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CYR61O00622 381 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 HAT1O14929 419 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 SMAD9O15198 467 aaKnown RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 ADCY6O43306 1168 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 HCRTR2O43614 444 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CBFA2T3O75081 653 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 NME6O75414 186 aaPredicted RBP4.87□□□□□ -1.63
SDCBP-213ENST00000630925 KRT36O76013 467 aa4.87□□□□□ -1.63
SDCBP-213ENST00000630925 CDK14O94921 469 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms