RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 RNF10Q8N5U6 811 aaKnown RBP22.28■■□□□ 1.16
SF1-220ENST00000626028 SPC24Q8NBT2 197 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 HTR3CQ8WXA8 447 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 OSBPL8Q9BZF1 889 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 NRSN2Q9GZP1 204 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 ABCG4Q9H172 646 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 RAD18Q9NS91 495 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 PKD2L2Q9NZM6 624 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 ZMIZ1Q9ULJ6 1067 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 UNC13CQ8NB66 2214 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 ZZEF1O43149 2961 aa22.28■■□□□ 1.16
SF1-220ENST00000626028 TRABD2BA6NFA1 517 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 TJP3O95049 919 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 CLDN7O95471 211 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 NDST3O95803 873 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 CEACAM5P06731 702 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 IVLP07476 585 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 SPINT3P49223 89 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 NOMO1Q15155 1222 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 PTPRRQ15256 657 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 CDCP2Q5VXM1 449 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 ZC3H18Q86VM9 953 aaKnown RBP22.27■■□□□ 1.16
SF1-220ENST00000626028 SLC35F3Q8IY50 421 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 UBL4BQ8N7F7 174 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 NXPE2Q96DL1 559 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 SCARF2Q96GP6 870 aaPredicted RBP22.27■■□□□ 1.16
SF1-220ENST00000626028 NFKBIL1Q9UBC1 381 aaPredicted RBP22.27■■□□□ 1.16
SF1-220ENST00000626028 AMFRQ9UKV5 643 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 PADI4Q9UM07 663 aa22.27■■□□□ 1.16
SF1-220ENST00000626028 APC2O95996 2303 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 FAM149AA5PLN7 773 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 TCEA3O75764 348 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 SOD1P00441 154 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 TNNT3P45378 269 aaPredicted RBP22.26■■□□□ 1.15
SF1-220ENST00000626028 DCDC1P59894 354 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 TARDBPQ13148 414 aaKnown RBP eCLIP22.26■■□□□ 1.15
SF1-220ENST00000626028 CCDC181Q5TID7 509 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 PEX26Q7Z412 305 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 PROSER1Q86XN7 944 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 GPBAR1Q8TDU6 330 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 HIC2Q96JB3 615 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 DEPDC7Q96QD5 511 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 FCRL5Q96RD9 977 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 CEP41Q9BYV8 373 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 TSGA10Q9BZW7 698 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 ZFYVE1Q9HBF4 777 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 CYP4F12Q9HCS2 524 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 FAM153AQ9UHL3 310 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 GPR34Q9UPC5 381 aa22.26■■□□□ 1.15
SF1-220ENST00000626028 GOLGA6CA6NDK9 693 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 GOLGA6BA6NDN3 693 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 MT-CO3P00414 261 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 GOLGA6DP0CG33 693 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 RTP5Q14D33 572 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 HENMT1Q5T8I9 393 aaKnown RBP22.25■■□□□ 1.15
SF1-220ENST00000626028 GUSBP11Q6P575 273 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 OGFOD3Q6PK18 319 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 EFL1Q7Z2Z2 1120 aaKnown RBP22.25■■□□□ 1.15
SF1-220ENST00000626028 TAF8Q7Z7C8 310 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 CCDC112Q8NEF3 446 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 MAPK15Q8TD08 544 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 ALG3Q92685 438 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 SCAMP4Q969E2 229 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 HAUS1Q96CS2 278 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 COX14Q96I36 57 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 HEMGNQ9BXL5 484 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 GSDMCQ9BYG8 508 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 TMEM168Q9H0V1 697 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 FAM83DQ9H4H8 585 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 TRABDQ9H4I3 376 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 MRPL40Q9NQ50 206 aaKnown RBP22.25■■□□□ 1.15
SF1-220ENST00000626028 GOLGA6AQ9NYA3 693 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 VPS18Q9P253 973 aa22.25■■□□□ 1.15
SF1-220ENST00000626028 KLHL8Q9P2G9 620 aaPredicted RBP22.25■■□□□ 1.15
SF1-220ENST00000626028 LOC285095A0A1B0GVY8 99 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 MACROD2A1Z1Q3 448 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 CPED1A4D0V7 1026 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 MT-CYBP00156 380 aaPredicted RBP22.24■■□□□ 1.15
SF1-220ENST00000626028 CELA2BP08218 269 aaPredicted RBP22.24■■□□□ 1.15
SF1-220ENST00000626028 PNLIPP16233 465 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 CD68P34810 354 aaPredicted RBP22.24■■□□□ 1.15
SF1-220ENST00000626028 ILF3Q12906 894 aaKnown RBP eCLIP22.24■■□□□ 1.15
SF1-220ENST00000626028 MPP3Q13368 585 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 GALNT3Q14435 633 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 LLGL1Q15334 1064 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 PDPK2PQ6A1A2 396 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 PID1Q7Z2X4 250 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 ZNF567Q8N184 647 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 TTC13Q8NBP0 860 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 GPR156Q8NFN8 814 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 SPATA22Q8NHS9 363 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 PPP1R2P1Q96PQ5 205 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 SMIM14Q96QK8 99 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 CARS2Q9HA77 564 aaKnown RBP22.24■■□□□ 1.15
SF1-220ENST00000626028 CD84Q9UIB8 345 aa22.24■■□□□ 1.15
SF1-220ENST00000626028 PCSK7Q16549 785 aa22.23■■□□□ 1.15
SF1-220ENST00000626028 KCTD16Q68DU8 428 aa22.23■■□□□ 1.15
SF1-220ENST00000626028 ITPRIPL1Q6GPH6 555 aa22.23■■□□□ 1.15
SF1-220ENST00000626028 RFLNAQ6ZTI6 216 aa22.23■■□□□ 1.15
SF1-220ENST00000626028 LYSMD3Q7Z3D4 306 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms