RNA–Protein interactions for RNA: ENST00000622963.3

SNHG5-213, Transcript of small nucleolar RNA host gene 5, human

TSL 5 BASIC

Gene SNHG5, Length 753 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-213	ENST00000622963	ZNF354C	Q86Y25	554 aa		11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	HCAR2	Q8TDS4	363 aa		11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	SLC37A2	Q8TED4	501 aa		11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	FNIP1	Q8TF40	1166 aa		11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	NELFB	Q8WX92	580 aa		11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	C18orf8	Q96DM3	657 aa		11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	COQ10A	Q96MF6	247 aa		11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	EFHD1	Q9BUP0	239 aa		11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	GSDMC	Q9BYG8	508 aa		11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	PDF	Q9HBH1	243 aa		11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	METTL5	Q9NRN9	209 aa	Known RBP	11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	SIDT1	Q9NXL6	827 aa	Known RBP	11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	LUZP4	Q9P127	313 aa		11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	APEX2	Q9UBZ4	518 aa		11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.65	□□□□□ -0.54
SNHG5-213	ENST00000622963	ZFHX3	Q15911	3703 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	CDC14C	A4D256	554 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	RASA4B	C9J798	803 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963		J3KR12	359 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	RASA4	O43374	803 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	LDLR	P01130	860 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	PLEK	P08567	350 aa	Predicted RBP	11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	ELFN1	P0C7U0	828 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	PRF1	P14222	555 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	DLST	P36957	453 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	ACTR1B	P42025	376 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	ACTR1A	P61163	376 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	PTK2	Q05397	1052 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	PTPRR	Q15256	657 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	LINC01559	Q495D7	138 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	CCDC14	Q49A88	953 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	DESI1	Q6ICB0	168 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	DPY19L2P1	Q6NXN4	242 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	BRAT1	Q6PJG6	821 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	CEACAM20	Q6UY09	585 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	DPPA4	Q7L190	304 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	DNAAF5	Q86Y56	855 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	RTL3	Q8N8U3	475 aa	Known RBP	11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	JOSD2	Q8TAC2	188 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	GPT2	Q8TD30	523 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	SMARCE1	Q969G3	411 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	ECHDC3	Q96DC8	303 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	RUFY1	Q96T51	708 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	TEX101	Q9BY14	249 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	FBXO8	Q9NRD0	319 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	KLHL3	Q9UH77	587 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	KCND3	Q9UK17	655 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	POLH	Q9Y253	713 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	AKAP9	Q99996	3911 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	CSMD2	Q7Z408	3487 aa		11.64	□□□□□ -0.55
SNHG5-213	ENST00000622963	CFAP69	A5D8W1	941 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	MAP3K6	O95382	1288 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	TNFAIP3	P21580	790 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	PON1	P27169	355 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	HDAC4	P56524	1084 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	WDR4	P57081	412 aa	Known RBP	11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	CDK3	Q00526	305 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	CHAF1B	Q13112	559 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	BIRC2	Q13490	618 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	CNGA3	Q16281	694 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	TAF3	Q5VWG9	929 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	DOK6	Q6PKX4	331 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	RFLNA	Q6ZTI6	216 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	ESX1	Q8N693	406 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963		Q8NA96	180 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	TMEM35B	Q8NCS4	154 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	RXFP2	Q8WXD0	754 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	CASKIN2	Q8WXE0	1202 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	ZNF641	Q96N77	438 aa	Predicted RBP	11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	DPYSL5	Q9BPU6	564 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	ZMYND15	Q9H091	742 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	B4GALT6	Q9UBX8	382 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	SLC17A4	Q9Y2C5	497 aa		11.63	□□□□□ -0.55
SNHG5-213	ENST00000622963	PRRC2C	Q9Y520	2896 aa	Known RBP	11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	ADGRG4	Q8IZF6	3080 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963		A0A0U1RQS6	177 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	TRAFD1	O14545	582 aa	Predicted RBP	11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	DDAH2	O95865	285 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	SOD1	P00441	154 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	LHCGR	P22888	699 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	ELAVL4	P26378	380 aa	Known RBP	11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	GRN	P28799	593 aa	Known RBP	11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	FASLG	P48023	281 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	COPB1	P53618	953 aa	Known RBP	11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	SNX16	P57768	344 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	GPLD1	P80108	840 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	RAPGEF1	Q13905	1077 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	MAP7	Q14244	749 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	ACOX1	Q15067	660 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	INPP5J	Q15735	1006 aa	Predicted RBP	11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	TRIM74	Q86UV6	250 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	FAM71A	Q8IYT1	594 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	SFRP1	Q8N474	314 aa		11.62	□□□□□ -0.55
SNHG5-213	ENST00000622963	TSEN2	Q8NCE0	465 aa	Known RBP	11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms