RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CADM4Q8NFZ8 388 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 ASB12Q8WXK4 309 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 FOXJ1Q92949 421 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 ZNF778Q96MU6 729 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 C1QTNF2Q9BXJ5 285 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 C6orf106Q9H6K1 298 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 TREX1Q9NSU2 369 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 NLE1Q9NVX2 485 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 PKD2L2Q9NZM6 624 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 NFKBIL1Q9UBC1 381 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 CHMP2BQ9UQN3 213 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 PCDHGA5Q9Y5G8 931 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 LAMA1P25391 3075 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 RALGAPA1Q6GYQ0 2036 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 IGLON5A6NGN9 336 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 LATO43561 262 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 BUD23O43709 281 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 ITPKAP23677 461 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 CCR5P51681 352 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 PPP2CBP62714 309 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 PPP2CAP67775 309 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 ACOX1Q15067 660 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 CCDC6Q16204 474 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 ZNF284Q2VY69 593 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 ZDHHC20Q5W0Z9 365 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 Q6ZVL8 140 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 GSPT2Q8IYD1 628 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 NRSN1Q8IZ57 195 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 FBXO36Q8NEA4 188 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 OR4K2Q8NGD2 314 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 PIGKQ92643 395 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 DTD2Q96FN9 168 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 DNAJC1Q96KC8 554 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 CDH19Q9H159 772 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 RAD18Q9NS91 495 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 KCTD5Q9NXV2 234 aa19.79■□□□□ 0.76
PDLIM2-221ENST00000622702 LRRK1Q38SD2 2015 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 WNT9AO14904 365 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 LZTS3O60299 673 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 RECQL5O94762 991 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 USP1O94782 785 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 TTC4O95801 387 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 BPIP17213 487 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 MPLP40238 635 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 HADHAP40939 763 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 ETV3P41162 512 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 MAGEA4P43358 317 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 DCDC1P59894 354 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 PTPRCAPQ14761 206 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 SLMAPQ14BN4 828 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 ANKRD20A4Q4UJ75 823 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 KIAA0895LQ68EN5 471 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 ZNF765Q7L2R6 523 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 ANKMY2Q8IV38 441 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 OR13C4Q8NGS5 318 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 OR13J1Q8NGT2 312 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 PYROXD1Q8WU10 500 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 MFSD3Q96ES6 412 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 BPIFA1Q9NP55 256 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 ZC3H7BQ9UGR2 993 aaKnown RBP19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 RPS6KL1Q9Y6S9 549 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 SCN8AQ9UQD0 1980 aa19.78■□□□□ 0.76
PDLIM2-221ENST00000622702 METTL12A8MUP2 240 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 MEI4A8MW99 385 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 H7C0S8 307 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 POLBP06746 335 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 FAM153BP0C7A2 387 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 NMBRP28336 390 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 FGL2Q14314 439 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 FAM153CQ494X1 144 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 HP1BP3Q5SSJ5 553 aaPredicted RBP19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 STEAP4Q687X5 459 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 ESRP1Q6NXG1 681 aaKnown RBP19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 RFLNAQ6ZTI6 216 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 NLRP8Q86W28 1048 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 RGL4Q8IZJ4 473 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 DTX3LQ8TDB6 740 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 PLEKHG4BQ96PX9 1271 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 TRIM56Q9BRZ2 755 aaKnown RBP19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 SLC17A9Q9BYT1 436 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 PLAC1Q9HBJ0 212 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 PARD6AQ9NPB6 346 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 TMEM74BQ9NUR3 256 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 SLC2A6Q9UGQ3 507 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 COQ6Q9Y2Z9 468 aa19.77■□□□□ 0.76
PDLIM2-221ENST00000622702 FAM186AA6NE01 2351 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 ATXN2Q99700 1313 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 ZCWPW2A0A1B0GU75 182 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 CCDC78A2IDD5 438 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 LRP3O75074 770 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 IGHV4-34P06331 123 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 MAOBP27338 520 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 NUDT1P36639 197 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 SGCGQ13326 291 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 SPANXN3Q5MJ09 141 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 WDR45BQ5MNZ6 344 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 CES3Q6UWW8 571 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 UNC5AQ6ZN44 842 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 SYT12Q8IV01 421 aa19.76■□□□□ 0.75
PDLIM2-221ENST00000622702 GPR26Q8NDV2 337 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms