RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 HMGB1P1B2RPK0 211 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 TRIM24O15164 1050 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 KDELR3O43731 214 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 SOX11P35716 441 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 CYP4F2P78329 520 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 NAA30Q147X3 362 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 PDCD2Q16342 344 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 MLIPQ5VWP3 458 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 LRRC66Q68CR7 880 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 TXNRD3NBQ6F5E7 133 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 LRRC8EQ6NSJ5 796 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 MSANTD2Q6P1R3 559 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 UBE2R2Q712K3 238 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 C11orf74Q86VG3 221 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 ZMIZ2Q8NF64 920 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 BRSK1Q8TDC3 778 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 METTL21AQ8WXB1 218 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 SCAMP4Q969E2 229 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 KIAA1143Q96AT1 154 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 DPYSL5Q9BPU6 564 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 STRADBQ9C0K7 418 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 TRIT1Q9H3H1 467 aaKnown RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 ALG9Q9H6U8 611 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 CDV3Q9UKY7 258 aaKnown RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 WNK3Q9BYP7 1800 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 PRR5-ARHGAP8B1AHC4 643 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 CHURC1-FNTBB4DL54 471 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 GLRA3O75311 464 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 USP1O94782 785 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 PKMP14618 531 aaKnown RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 TLX1P31314 330 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 FNTBP49356 437 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 ZNF33AQ06730 810 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 RGS1Q08116 209 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 SCARA3Q6AZY7 606 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 SPRED2Q7Z698 418 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 MILR1Q7Z6M3 343 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 LRRTM4Q86VH4 590 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 CPNE8Q86YQ8 564 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 GSTCDQ8NEC7 633 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 FIBINQ8TAL6 211 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 LINGO1Q96FE5 620 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 TRMT2BQ96GJ1 504 aaKnown RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 ZNF514Q96K75 400 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 NECAB3Q96P71 396 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 GBA3Q9H227 469 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 STK38LQ9Y2H1 464 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 R3HDM2Q9Y2K5 976 aaKnown RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 OR10H2O60403 315 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 ABLIM3O94929 683 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 RBMS1P29558 406 aaKnown RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 RPL21P46778 160 aaKnown RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 DRG2P55039 364 aaKnown RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 SLC7A9P82251 487 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 MRPS21P82921 87 aaKnown RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 CACNG1Q06432 222 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 EFTUD2Q15029 972 aaKnown RBP eCLIP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 PFKFB4Q16877 469 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 FSCBQ5H9T9 825 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 RNF43Q68DV7 783 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 FAAH2Q6GMR7 532 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 RSPO2Q6UXX9 243 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 EFL1Q7Z2Z2 1120 aaKnown RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 RABEPKQ7Z6M1 372 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 CCDC126Q96EE4 140 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 BBS4Q96RK4 519 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 ATG10Q9H0Y0 220 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 POLR3BQ9NW08 1133 aaPredicted RBP9.06□□□□□ -0.96
HDAC9-229ENST00000622668 TMEM248Q9NWD8 314 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
HDAC9-229ENST00000622668 MBTPS2O43462 519 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 TSPAN6O43657 245 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 NUDT14O95848 222 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 TCF4P15884 667 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 IGFBP6P24592 240 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-229ENST00000622668 HTRA4P83105 476 aaPredicted RBP9.05□□□□□ -0.96
HDAC9-229ENST00000622668 TAF11Q15544 211 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 NCEH1Q6PIU2 408 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 TSSK4Q6SA08 328 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 IFNEQ86WN2 208 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 PRELID2Q8N945 189 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 RAB7BQ96AH8 199 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 WDR92Q96MX6 357 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 KLHL25Q9H0H3 589 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 TRPC4Q9UBN4 977 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 FTSJ1Q9UET6 329 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 PADI4Q9UM07 663 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 MTCH2Q9Y6C9 303 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 A0A1W2PPC1 479 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 TARSL2A2RTX5 802 aaKnown RBP9.05□□□□□ -0.96
HDAC9-229ENST00000622668 FAM86C2PA6NEL3 165 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 ANKRD66B4E2M5 251 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 ANGPT2O15123 496 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 POP7O75817 140 aaKnown RBP9.05□□□□□ -0.96
HDAC9-229ENST00000622668 SRPRAP08240 638 aaKnown RBP9.05□□□□□ -0.96
HDAC9-229ENST00000622668 GLDCP23378 1020 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 SKIV2L2P42285 1042 aaKnown RBP9.05□□□□□ -0.96
HDAC9-229ENST00000622668 ACSM2AQ08AH3 577 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 ADAM15Q13444 863 aa9.05□□□□□ -0.96
HDAC9-229ENST00000622668 SERINC3Q13530 473 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms