RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 FAM69AQ5T7M9 428 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 NAA35Q5VZE5 725 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 METTL2BQ6P1Q9 378 aaKnown RBP4.28□□□□□ -1.72
BRCA1-229ENST00000621897 C19orf48Q6RUI8 117 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 SLC46A3Q7Z3Q1 461 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 KMT5CQ86Y97 462 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 KLHDC8BQ8IXV7 354 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.28□□□□□ -1.72
BRCA1-229ENST00000621897 CADM4Q8NFZ8 388 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 HMGCLL1Q8TB92 370 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 MAGEC3Q8TD91 643 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 RHBDF1Q96CC6 855 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 CDCA5Q96FF9 252 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 METTL2AQ96IZ6 378 aaKnown RBP4.28□□□□□ -1.72
BRCA1-229ENST00000621897 MTERF1Q99551 399 aaKnown RBP4.28□□□□□ -1.72
BRCA1-229ENST00000621897 SH3GL2Q99962 352 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 TRMT61BQ9BVS5 477 aaKnown RBP4.28□□□□□ -1.72
BRCA1-229ENST00000621897 SLC25A18Q9H1K4 315 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 ZNF334Q9HCZ1 680 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-229ENST00000621897 TAAR2Q9P1P5 351 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 POU2F3Q9UKI9 436 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 TTC7AQ9ULT0 858 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-229ENST00000621897 ERVK-11Q9UQG0 969 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 OR2W1Q9Y3N9 320 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 CEPT1Q9Y6K0 416 aa4.28□□□□□ -1.72
BRCA1-229ENST00000621897 GOLGA6L9A6NEM1 432 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 TNFSF14O43557 240 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 ANOS1P23352 680 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 RRM1P23921 792 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 ABCD3P28288 659 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 USP8P40818 1118 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 IL15P40933 162 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-229ENST00000621897 MAPK9P45984 424 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 GABRB2P47870 512 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 FMO5P49326 533 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 TUBP50607 506 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 CRIP2P52943 208 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-229ENST00000621897 LINC01547P58512 204 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-229ENST00000621897 FOXD4Q12950 439 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-229ENST00000621897 PTP4A2Q12974 167 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 BIRC3Q13489 604 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 FGFBP1Q14512 234 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 CCDC96Q2M329 555 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 GGNBP1Q5YKI7 109 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 PMS2CLQ68D20 193 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 DUS1LQ6P1R4 473 aaKnown RBP4.27□□□□□ -1.73
BRCA1-229ENST00000621897 PQLC2Q6ZP29 291 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 SLC26A9Q7LBE3 791 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 RNF113BQ8IZP6 322 aaKnown RBP4.27□□□□□ -1.73
BRCA1-229ENST00000621897 PCDH20Q8N6Y1 951 aaKnown RBP4.27□□□□□ -1.73
BRCA1-229ENST00000621897 SLC24A4Q8NFF2 622 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 RNF125Q96EQ8 232 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 ALG14Q96F25 216 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 GRAMD2BQ96HH9 432 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 PPP1R13BQ96KQ4 1090 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 SEBOXQ9HB31 216 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-229ENST00000621897 SLC6A13Q9NSD5 602 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 PNMA2Q9UL42 364 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 PADI3Q9ULW8 664 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 LOXL2Q9Y4K0 774 aa4.27□□□□□ -1.73
BRCA1-229ENST00000621897 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 LILRA5A6NI73 299 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 USP17L23D6RBM5 183 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 VCYO14598 125 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 CAPN9O14815 690 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 F9P00740 461 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 PYGLP06737 847 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 FGF5P12034 268 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 CD53P19397 219 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 CDAP32320 146 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 ABCD1P33897 745 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 TIMP3P35625 211 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 PITX1P78337 314 aaPredicted RBP4.26□□□□□ -1.73
BRCA1-229ENST00000621897 PDE1BQ01064 536 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 NFE4Q86UQ8 179 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 EPHX4Q8IUS5 362 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 BEST3Q8N1M1 668 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 DMBX1Q8NFW5 382 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 MYRIPQ8NFW9 859 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 ST8SIA4Q92187 359 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 ORAI1Q96D31 301 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 C1QTNF5Q9BXJ0 243 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 BRF2Q9HAW0 419 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 VEZTQ9HBM0 779 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 GAB2Q9UQC2 676 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 RPS6KL1Q9Y6S9 549 aa4.26□□□□□ -1.73
BRCA1-229ENST00000621897 EGFP01133 1207 aa4.25□□□□□ -1.73
BRCA1-229ENST00000621897 HOXB5P09067 269 aa4.25□□□□□ -1.73
BRCA1-229ENST00000621897 CPOXP36551 454 aa4.25□□□□□ -1.73
BRCA1-229ENST00000621897 GNL1P36915 607 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-229ENST00000621897 PAFAH1B1P43034 410 aa4.25□□□□□ -1.73
BRCA1-229ENST00000621897 PPM1FP49593 454 aaPredicted RBP4.25□□□□□ -1.73
BRCA1-229ENST00000621897 PLA2G4FQ68DD2 849 aa4.25□□□□□ -1.73
BRCA1-229ENST00000621897 TRNP1Q6NT89 227 aa4.25□□□□□ -1.73
BRCA1-229ENST00000621897 ASB18Q6ZVZ8 466 aa4.25□□□□□ -1.73
BRCA1-229ENST00000621897 CCDC13Q8IYE1 715 aa4.25□□□□□ -1.73
BRCA1-229ENST00000621897 CNPY4Q8N129 248 aa4.25□□□□□ -1.73
BRCA1-229ENST00000621897 ACVR1CQ8NER5 493 aa4.25□□□□□ -1.73
BRCA1-229ENST00000621897 IFIH1Q9BYX4 1025 aaKnown RBP4.25□□□□□ -1.73
BRCA1-229ENST00000621897 SCRT2Q9NQ03 307 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms