RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PAGE2Q7Z2X7 111 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 VN1R5Q7Z5H4 357 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 SERPINA9Q86WD7 417 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 SMG8Q8ND04 991 aaKnown RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 WFIKKN2Q8TEU8 576 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 NACC2Q96BF6 587 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 OXNAD1Q96HP4 312 aaPredicted RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 SLC25A23Q9BV35 468 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 FAIM2Q9BWQ8 316 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 SUV39H2Q9H5I1 410 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 CXorf56Q9H5V9 222 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 FAM237BA0A1B0GVD1 139 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 GCATO75600 419 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 PDE5AO76074 875 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 PROCP04070 461 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 ASLP04424 464 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 ALADP13716 330 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 HLA-EP13747 358 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 HOXA11P31270 313 aaPredicted RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 MAPKAPK3Q16644 382 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 RTP2Q5QGT7 225 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 TCHHL1Q5QJ38 904 aaPredicted RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 CYP4Z1Q86W10 505 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 TSSK3Q96PN8 268 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 CDRT15Q96T59 188 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 ROGDIQ9GZN7 287 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 ARMC7Q9H6L4 198 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 TCAF1Q9Y4C2 921 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 PCDHB1Q9Y5F3 818 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 STYXL1Q9Y6J8 313 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 SQORQ9Y6N5 450 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 ILVBLA1L0T0 632 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 RASSF10A6NK89 507 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 J3KR12 359 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 HDAC3O15379 428 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 HNRNPRO43390 633 aaKnown RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 MTX2O75431 263 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 METTL18O95568 372 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 NOS3P29474 1203 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 HNRNPH1P31943 449 aaKnown RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 RPIAP49247 311 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 PKNOX1P55347 436 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 CSTF3Q12996 717 aaKnown RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 USP4Q13107 963 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 PEX6Q13608 980 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 MINDY4Q4G0A6 757 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 FGD3Q5JSP0 725 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 WLSQ5T9L3 541 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 ZCCHC8Q6NZY4 707 aaKnown RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 OLFML1Q6UWY5 402 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 ARMCX6Q7L4S7 300 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 EXOC3L1Q86VI1 746 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 DENND6AQ8IWF6 608 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 PRSS58Q8IYP2 241 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 MICU2Q8IYU8 434 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 NRSN1Q8IZ57 195 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 RASGEF1CQ8N431 466 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 CMASQ8NFW8 434 aaPredicted RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 BRSK1Q8TDC3 778 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 UTP15Q8TED0 518 aaKnown RBP9.22□□□□□ -0.93
GGA3-223ENST00000621870 ESAMQ96AP7 390 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 FBXL12Q9NXK8 326 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 PACSIN3Q9UKS6 424 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 SCML2Q9UQR0 700 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 HS3ST4Q9Y661 456 aa9.22□□□□□ -0.93
GGA3-223ENST00000621870 FPGTO14772 594 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 AZIN1O14977 448 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 STK16O75716 305 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 TM7SF2O76062 418 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 GJB5O95377 273 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 ABHD2P08910 425 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 FAM163BP0C2L3 166 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 IMPDH2P12268 514 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 HOXB2P14652 356 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 NMBRP28336 390 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 CRATP43155 626 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 CCNHP51946 323 aaPredicted RBP9.21□□□□□ -0.93
GGA3-223ENST00000621870 GDF10P55107 478 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 RGS1Q08116 209 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 PTP4A2Q12974 167 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 CARD16Q5EG05 197 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 TSTD2Q5T7W7 516 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 CPNE9Q8IYJ1 553 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 CDK20Q8IZL9 346 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 DSELQ8IZU8 1212 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 TMEM132CQ8N3T6 1108 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 OR2AP1Q8NGE2 309 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 LCN9Q8WX39 176 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 NXNL1Q96CM4 212 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 AARSD1Q9BTE6 412 aaKnown RBP9.21□□□□□ -0.93
GGA3-223ENST00000621870 XYLT2Q9H1B5 865 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 ATAD3AQ9NVI7 634 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 GEMIN8Q9NWZ8 242 aaKnown RBP9.21□□□□□ -0.93
GGA3-223ENST00000621870 SCN3BQ9NY72 215 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 GNEQ9Y223 722 aaKnown RBP9.21□□□□□ -0.93
GGA3-223ENST00000621870 INVSQ9Y283 1065 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 DNAJC13O75165 2243 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 H3BQ06 376 aaPredicted RBP9.21□□□□□ -0.93
GGA3-223ENST00000621870 CNTN5O94779 1100 aa9.21□□□□□ -0.93
GGA3-223ENST00000621870 EPN2O95208 641 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms