RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 HTR1BP28222 390 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 TRIM23P36406 574 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 GRIA1P42261 906 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 PTGIRP43119 386 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 ARHGAP8P85298 464 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 DR1Q01658 176 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 MSLNQ13421 630 aaPredicted RBP18.51■□□□□ 0.55
CIRBP-245ENST00000621399 ZNF423Q2M1K9 1284 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 TPRG1LQ5T0D9 272 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 STPG1Q5TH74 334 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 ALS2CLQ60I27 953 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 GPR26Q8NDV2 337 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 SPATA4Q8NEY3 305 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 FUBP1Q96AE4 644 aaKnown RBP18.51■□□□□ 0.55
CIRBP-245ENST00000621399 KRT12Q99456 494 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 AGAP2Q99490 1192 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 ELF4Q99607 663 aaPredicted RBP18.51■□□□□ 0.55
CIRBP-245ENST00000621399 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.51■□□□□ 0.55
CIRBP-245ENST00000621399 IL17CQ9P0M4 197 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 CDC23Q9UJX2 597 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 PKP3Q9Y446 797 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 ARL5AQ9Y689 179 aa18.51■□□□□ 0.55
CIRBP-245ENST00000621399 DOCK9Q9BZ29 2069 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 C4orf47A7E2U8 309 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 STX7O15400 261 aaKnown RBP18.5■□□□□ 0.55
CIRBP-245ENST00000621399 PYGLP06737 847 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 LPOP22079 712 aaPredicted RBP18.5■□□□□ 0.55
CIRBP-245ENST00000621399 TEAD1P28347 426 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 ADCY8P40145 1251 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 ARRB1P49407 418 aaPredicted RBP18.5■□□□□ 0.55
CIRBP-245ENST00000621399 CDK16Q00536 496 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 PDE1BQ01064 536 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 CKAP4Q07065 602 aaKnown RBP18.5■□□□□ 0.55
CIRBP-245ENST00000621399 FZD2Q14332 565 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 POU6F1Q14863 301 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 NFATC4Q14934 902 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 UAP1L1Q3KQV9 507 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 HEATR4Q86WZ0 1026 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 OXR1Q8N573 874 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 KIF18AQ8NI77 898 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 CASS4Q9NQ75 786 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 PHPT1Q9NRX4 125 aaPredicted RBP18.5■□□□□ 0.55
CIRBP-245ENST00000621399 DNAAF2Q9NVR5 837 aaKnown RBP18.5■□□□□ 0.55
CIRBP-245ENST00000621399 ASIC3Q9UHC3 531 aa18.5■□□□□ 0.55
CIRBP-245ENST00000621399 FNDC3AQ9Y2H6 1198 aaKnown RBP18.5■□□□□ 0.55
CIRBP-245ENST00000621399 RALGAPA1Q6GYQ0 2036 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 PPFIA2O75334 1257 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 SOD1P00441 154 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 HOXC4P09017 264 aaPredicted RBP18.49■□□□□ 0.55
CIRBP-245ENST00000621399 TPSB2P20231 275 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 KELP23276 732 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 KIAA1024LP59773 190 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 DCDC1P59894 354 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 PTK6Q13882 451 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 SEPT6Q14141 434 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 TPSAB1Q15661 275 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 ZNF542PQ5EBM4 170 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 CERCAMQ5T4B2 595 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 HENMT1Q5T8I9 393 aaKnown RBP18.49■□□□□ 0.55
CIRBP-245ENST00000621399 ZDHHC20Q5W0Z9 365 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 ENPP7Q6UWV6 458 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 ADAMTSL4Q6UY14 1074 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 MACC1Q6ZN28 852 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 SYDE1Q6ZW31 735 aaPredicted RBP18.49■□□□□ 0.55
CIRBP-245ENST00000621399 PARGQ86W56 976 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 PLEKHG4BQ96PX9 1271 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 LGR4Q9BXB1 951 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 SPATA16Q9BXB7 569 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 TEX101Q9BY14 249 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 DNAJC28Q9NX36 388 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 KCTD3Q9Y597 815 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 SPTBN4Q9H254 2564 aa18.49■□□□□ 0.55
CIRBP-245ENST00000621399 PCDH15Q96QU1 1955 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 A0A1B0GTQ1 180 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 TCRBV7S3A2A0A539 114 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 AP3B1O00203 1094 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 INPP4BO15327 924 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 MYCLP1P12525 358 aaPredicted RBP18.48■□□□□ 0.55
CIRBP-245ENST00000621399 SPAM1P38567 509 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 MAGEA6P43360 314 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 CCT8P50990 548 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 SARNPP82979 210 aaKnown RBP18.48■□□□□ 0.55
CIRBP-245ENST00000621399 CDK3Q00526 305 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 IL9RQ01113 521 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 C2orf54Q08AI8 447 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 DHX34Q14147 1143 aaKnown RBP18.48■□□□□ 0.55
CIRBP-245ENST00000621399 KCNJ11Q14654 390 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 PTPRCAPQ14761 206 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 WHAMMP3Q1A5X7 153 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 JAMLQ86YT9 394 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 TRAM1L1Q8N609 369 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 OR4K2Q8NGD2 314 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 NETO1Q8TDF5 533 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 CPT1BQ92523 772 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 WDR92Q96MX6 357 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 ZSCAN5AQ9BUG6 496 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 IL26Q9NPH9 171 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 TM7SF3Q9NS93 570 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 NFKBIL1Q9UBC1 381 aaPredicted RBP18.48■□□□□ 0.55
CIRBP-245ENST00000621399 LRRK1Q38SD2 2015 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms