RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 FAM47BQ8NA70 645 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 OR2T34Q8NGX1 318 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 OR2T3Q8NH03 318 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 C1GALT1C1Q96EU7 318 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CBWD1Q9BRT8 395 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 HPF1Q9NWY4 346 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 GRHL1Q9NZI5 618 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 EIF3KQ9UBQ5 218 aaKnown RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 SH3D21A4FU49 640 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ANXA5P08758 320 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CYP2F1P24903 491 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 GABRB2P47870 512 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 MMP14P50281 582 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 MAPK12P53778 367 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 GNG2P59768 71 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 WDR49Q8IV35 697 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 POU5F2Q8N7G0 328 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 OR5J2Q8NH18 312 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ZFAND2BQ8WV99 257 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 SLC4A5Q9BY07 1137 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF350Q9GZX5 532 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ISPDA4D126 451 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 WNT10BO00744 389 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 KRT33AO76009 404 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 NDUFB10O96000 172 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ERBB2P04626 1255 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 C2orf27AQ580R0 203 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 RBM48Q5RL73 367 aaKnown RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 RETSATQ6NUM9 610 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF512BQ96KM6 892 aaPredicted RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 TMEM121Q9BTD3 319 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CD93Q9NPY3 652 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 TMEM9Q9P0T7 183 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 COG5Q9UP83 839 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 PCDHGB7Q9Y5F8 929 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 MYH10P35580 1976 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 C2orf74A8MZ97 194 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 FGF10O15520 208 aaPredicted RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 TRIM3O75382 744 aaPredicted RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CATP04040 527 aaKnown RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CES1P23141 567 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 HSD3B2P26439 372 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ACSL1P33121 698 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ACOT2P49753 483 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 TMBIM6P55061 237 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ITGA7Q13683 1181 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 PRAMEF19Q5SWL8 479 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 LRRC38Q5VT99 294 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ADAMTSL2Q86TH1 951 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 LAPTM4BQ86VI4 370 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CNTD1Q8N815 330 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 FAM13CQ8NE31 585 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ETNPPLQ8TBG4 499 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 SERPINB11Q96P15 392 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 FBXO44Q9H4M3 255 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 PIF1Q9H611 641 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 SUCOQ9UBS9 1254 aaKnown RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 PITPNM1O00562 1244 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 SCAMP1O15126 338 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 TM7SF2O76062 418 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ZBTB11O95625 1053 aaPredicted RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF3P17036 446 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 FGFR3P22607 806 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 PDHA2P29803 388 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 RPL4P36578 427 aaKnown RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 RPP38P78345 283 aaKnown RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 FOXO4P98177 505 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF45Q02386 682 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 HFE2Q6ZVN8 426 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 NT5DC3Q86UY8 548 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ASB12Q8WXK4 309 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 MED8Q96G25 268 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 NODALQ96S42 347 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CGRRF1Q99675 332 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF471Q9BX82 626 aaPredicted RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 METTL8Q9H825 291 aaKnown RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 PCDHGB2Q9Y5G2 931 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 MAU2Q9Y6X3 613 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 NRKQ7Z2Y5 1582 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 A0A087WZ62 844 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 GCATO75600 419 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ENDOD1O94919 500 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 FSHRP23945 695 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 MATKP42679 507 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CDKL1Q00532 357 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 TDGQ13569 410 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CBWD6Q4V339 395 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 TCEAL6Q6IPX3 200 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ZNF720Q7Z2F6 126 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CYP2U1Q7Z449 544 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 PACRGLQ8N7B6 248 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 OR14K1Q8NGZ2 314 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ACTL9Q8TC94 416 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 DNAJB3Q8WWF6 145 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ROPN1LQ96C74 230 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 COMMD4Q9H0A8 199 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 NXF3Q9H4D5 531 aaKnown RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 GULP1Q9UBP9 304 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 MYO9BQ13459 2157 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms