RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 EEDO75530 441 aaKnown RBP13.06□□□□□ -0.32
SKP2-209ENST00000620197 CD247P20963 164 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 POLR2IP36954 125 aaKnown RBP13.06□□□□□ -0.32
SKP2-209ENST00000620197 CAPGP40121 348 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 HLCSP50747 726 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 ARSDP51689 593 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 OR4D1Q15615 310 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 ZNF829Q3KNS6 432 aaPredicted RBP13.06□□□□□ -0.32
SKP2-209ENST00000620197 PYCR3Q53H96 274 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 TBCELQ5QJ74 424 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 GPR158Q5T848 1215 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 MOB2Q70IA6 237 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 DCP1BQ8IZD4 617 aaKnown RBP13.06□□□□□ -0.32
SKP2-209ENST00000620197 UMODL1-AS1Q8N2C9 162 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 GPRC5AQ8NFJ5 357 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 OR6J1Q8NGC5 347 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 C1orf74Q96LT6 269 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 ZFP42Q96MM3 310 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 TRIM15Q9C019 465 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 UPF3AQ9H1J1 476 aaKnown RBP13.06□□□□□ -0.32
SKP2-209ENST00000620197 NTN4Q9HB63 628 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 MARCH4Q9P2E8 410 aaPredicted RBP13.06□□□□□ -0.32
SKP2-209ENST00000620197 POLG2Q9UHN1 485 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 SLC45A1Q9Y2W3 748 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 MED16Q9Y2X0 877 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 PTGDR2Q9Y5Y4 395 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 MEIS3P2A8K0S8 358 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 H0YAE9 185 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 PAGE1O75459 146 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 SEC14L2O76054 403 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 HNRNPCP07910 306 aaKnown RBP eCLIP13.06□□□□□ -0.32
SKP2-209ENST00000620197 PLK1P53350 603 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 PHEXP78562 749 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 XAF1Q6GPH4 301 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 HDAC10Q969S8 669 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 PHF21BQ96EK2 531 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 CXorf21Q9HAI6 301 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 PALMDQ9NP74 551 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 CACNG4Q9UBN1 327 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 GRXCR2A6NFK2 248 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 BOLA2-SMG1P6H3BVE0 249 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 HRH2P25021 359 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 BAG6P46379 1132 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 AFF1P51825 1210 aaKnown RBP13.05□□□□□ -0.32
SKP2-209ENST00000620197 VPS26BQ4G0F5 336 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 ANKRD26P1Q6NSI1 321 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 PIM3Q86V86 326 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 CLVS1Q8IUQ0 354 aaPredicted RBP13.05□□□□□ -0.32
SKP2-209ENST00000620197 MIER2Q8N344 545 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 ZBTB8BQ8NAP8 495 aaPredicted RBP13.05□□□□□ -0.32
SKP2-209ENST00000620197 PNPT1Q8TCS8 783 aaKnown RBP13.05□□□□□ -0.32
SKP2-209ENST00000620197 TWIST2Q8WVJ9 160 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 DNAJB3Q8WWF6 145 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 MYLPFQ96A32 169 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 FBXL20Q96IG2 436 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 ALG9Q9H6U8 611 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 INIPQ9NRY2 104 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 TMLHEQ9NVH6 421 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 SH3GLB1Q9Y371 365 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 DNAH12Q6ZR08 3092 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 A0A1W2PP18 115 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 SAC3D1A6NKF1 404 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 H3BMM5 538 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 PIP5K1BO14986 540 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 UMPSP11172 480 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 FCGR1AP12314 374 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 SERPINH1P50454 418 aaKnown RBP13.05□□□□□ -0.32
SKP2-209ENST00000620197 CLCNKBP51801 687 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 INPP5AQ14642 412 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 UPP1Q16831 310 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 KIAA2013Q8IYS2 634 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 ARRDC2Q8TBH0 407 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 TEX37Q96LM6 180 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 SLC30A3Q99726 388 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 CATSPERBQ9H7T0 1116 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 RBM22Q9NW64 420 aaKnown RBP eCLIP13.05□□□□□ -0.324e-6■■■■□ 24.3
SKP2-209ENST00000620197 ATP6AP2A0A1C7CYW4 349 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 TNPO2O14787 897 aaKnown RBP13.05□□□□□ -0.32
SKP2-209ENST00000620197 SNAP91O60641 907 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 ATP6AP2O75787 350 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 SULT1C4O75897 302 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 ZNF37AP17032 561 aaPredicted RBP13.05□□□□□ -0.32
SKP2-209ENST00000620197 FASP25445 335 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 PSMA4P25789 261 aaKnown RBP13.05□□□□□ -0.32
SKP2-209ENST00000620197 APLP1P51693 650 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 BTG3Q14201 252 aaPredicted RBP13.05□□□□□ -0.32
SKP2-209ENST00000620197 TGFBIQ15582 683 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 TYSND1Q2T9J0 566 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 GTF2IRD2BQ6EKJ0 949 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 TTC33Q6PID6 262 aaPredicted RBP13.05□□□□□ -0.32
SKP2-209ENST00000620197 ABRAXAS1Q6UWZ7 409 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 LAYNQ6UX15 382 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 GTF2IRD2Q86UP8 949 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 ADARB2Q9NS39 739 aaKnown RBP13.05□□□□□ -0.32
SKP2-209ENST00000620197 SMPD3Q9NY59 655 aaPredicted RBP13.05□□□□□ -0.32
SKP2-209ENST00000620197 RIMKLBQ9ULI2 386 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 HS3ST4Q9Y661 456 aa13.05□□□□□ -0.32
SKP2-209ENST00000620197 FAM149AA5PLN7 773 aa13.04□□□□□ -0.32
SKP2-209ENST00000620197 PMPCBO75439 489 aa13.04□□□□□ -0.32
SKP2-209ENST00000620197 RPS17P08708 135 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms