RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 CCDC28BQ9BUN5 200 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 C2orf49Q9BVC5 232 aaPredicted RBP25.33■■□□□ 1.65
VEGFC-202ENST00000618562 SHCBP1LQ9BZQ2 653 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 S100A14Q9HCY8 104 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 TDP1Q9NUW8 608 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 ARIH1Q9Y4X5 557 aaPredicted RBP25.33■■□□□ 1.65
VEGFC-202ENST00000618562 RAI2Q9Y5P3 530 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 LOC100653049A0A140TA62 436 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 NPHS1O60500 1241 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 KRT34O76011 436 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 THRAP10827 490 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 CD70P32970 193 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 ERVK-21P61565 698 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 ACVR1Q04771 509 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 ADGRD2Q7Z7M1 963 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 HDAC10Q969S8 669 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 ZNF707Q96C28 371 aaPredicted RBP25.33■■□□□ 1.65
VEGFC-202ENST00000618562 NXNL1Q96CM4 212 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 PPM1HQ9ULR3 514 aa25.33■■□□□ 1.65
VEGFC-202ENST00000618562 YBX2Q9Y2T7 364 aaKnown RBP25.33■■□□□ 1.65
VEGFC-202ENST00000618562 SLC7A4O43246 635 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 GRID2O43424 1007 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 SERPINB5P36952 375 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 EPHB1P54762 984 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 SLC12A2P55011 1212 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 TAS2R39P59534 338 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 RHOAP61586 193 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 ZNF460Q14592 562 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 PDE12Q6L8Q7 609 aaKnown RBP25.32■■□□□ 1.64
VEGFC-202ENST00000618562 NCEH1Q6PIU2 408 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 CPSF7Q8N684 471 aaKnown RBP25.32■■□□□ 1.64
VEGFC-202ENST00000618562 ZSWIM3Q96MP5 696 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 TTC1Q99614 292 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 ZDHHC7Q9NXF8 308 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 KIAA1522Q9P206 1035 aaPredicted RBP25.32■■□□□ 1.64
VEGFC-202ENST00000618562 INTS6Q9UL03 887 aaKnown RBP25.32■■□□□ 1.64
VEGFC-202ENST00000618562 SPO11Q9Y5K1 396 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 TRANK1O15050 2925 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 AURKAO14965 403 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 BUD23O43709 281 aaKnown RBP25.32■■□□□ 1.64
VEGFC-202ENST00000618562 KIF1CO43896 1103 aaKnown RBP25.32■■□□□ 1.64
VEGFC-202ENST00000618562 PGGT1BP53609 377 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 TBL3Q12788 808 aaKnown RBP25.32■■□□□ 1.64
VEGFC-202ENST00000618562 TRAF2Q12933 501 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 DLG1Q12959 904 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 PTPRCAPQ14761 206 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 LSM12Q3MHD2 195 aaKnown RBP25.32■■□□□ 1.64
VEGFC-202ENST00000618562 CAPRIN2Q6IMN6 1127 aaKnown RBP25.32■■□□□ 1.64
VEGFC-202ENST00000618562 LSMEM2Q8N112 164 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 FBXW8Q8N3Y1 598 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 PEX13Q92968 403 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 RMDN1Q96DB5 314 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 DNAJC1Q96KC8 554 aaKnown RBP25.32■■□□□ 1.64
VEGFC-202ENST00000618562 SAMD11Q96NU1 681 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 LENG8Q96PV6 779 aaPredicted RBP25.32■■□□□ 1.64
VEGFC-202ENST00000618562 MFSD1Q9H3U5 465 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 ZDHHC2Q9UIJ5 367 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 CDYLQ9Y232 598 aa25.32■■□□□ 1.64
VEGFC-202ENST00000618562 CYBBP04839 570 aa25.31■■□□□ 1.64
VEGFC-202ENST00000618562 PIK3R1P27986 724 aa25.31■■□□□ 1.64
VEGFC-202ENST00000618562 DNAJB13P59910 316 aa25.31■■□□□ 1.64
VEGFC-202ENST00000618562 PLEKHG6Q3KR16 790 aa25.31■■□□□ 1.64
VEGFC-202ENST00000618562 ATXN7L2Q5T6C5 722 aaPredicted RBP25.31■■□□□ 1.64
VEGFC-202ENST00000618562 RETSATQ6NUM9 610 aa25.31■■□□□ 1.64
VEGFC-202ENST00000618562 PIWIL4Q7Z3Z4 852 aaKnown RBP25.31■■□□□ 1.64
VEGFC-202ENST00000618562 PTAR1Q7Z6K3 402 aaPredicted RBP25.31■■□□□ 1.64
VEGFC-202ENST00000618562 KBTBD2Q8IY47 623 aa25.31■■□□□ 1.64
VEGFC-202ENST00000618562 ACDQ96AP0 544 aa25.31■■□□□ 1.64
VEGFC-202ENST00000618562 LMLNQ96KR4 655 aa25.31■■□□□ 1.64
VEGFC-202ENST00000618562 ZNF385DQ9H6B1 395 aa25.31■■□□□ 1.64
VEGFC-202ENST00000618562 WDR55Q9H6Y2 383 aaPredicted RBP25.31■■□□□ 1.64
VEGFC-202ENST00000618562 CERS4Q9HA82 394 aa25.31■■□□□ 1.64
VEGFC-202ENST00000618562 GOLGA8QA0A0J9YX86 632 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 RGSL1A5PLK6 1076 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 GOLGA8OA6NCC3 632 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 SOBPA7XYQ1 873 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 GOLGA8NF8WBI6 632 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 SMAD6O43541 496 aaKnown RBP25.3■■□□□ 1.64
VEGFC-202ENST00000618562 MTTPP55157 894 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 LAMB3Q13751 1172 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 CCNIQ14094 377 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 GALNT7Q86SF2 657 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 TMEM25Q86YD3 366 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 APLFQ8IW19 511 aaPredicted RBP25.3■■□□□ 1.64
VEGFC-202ENST00000618562 OR6P1Q8NGX9 317 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 TBATAQ96M53 351 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 SMIM14Q96QK8 99 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 NCKIPSDQ9NZQ3 722 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 POMPQ9Y244 141 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 OR51F1A6NGY5 319 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 PDE5AO76074 875 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 EPHA3P29320 983 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 PPARGP37231 505 aaPredicted RBP25.3■■□□□ 1.64
VEGFC-202ENST00000618562 CLCN5P51795 746 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 PRAMEP78395 509 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 ZNF77Q15935 545 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 ZNF789Q5FWF6 425 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 PNPLA1Q8N8W4 532 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 LPCAT1Q8NF37 534 aa25.3■■□□□ 1.64
VEGFC-202ENST00000618562 OR13C4Q8NGS5 318 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms