RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 C3orf18Q9UK00 162 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 MKLN1Q9UL63 735 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 VPS9D1Q9Y2B5 631 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 NDUFAF1Q9Y375 327 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 GLI3P10071 1580 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 hCG_1818297A0A087WSY0 165 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 A0A1B0GW55 424 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 HMX3A6NHT5 357 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 DFNA5O60443 496 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 KCNK2O95069 426 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 CHRNGP07510 517 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 DUX4L2P0CJ85 424 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 DUX4L3P0CJ86 424 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 DUX4L4P0CJ87 422 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 DUX4L5P0CJ88 424 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 DUX4L6P0CJ89 424 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 DUX4L7P0CJ90 424 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 FGF3P11487 239 aaPredicted RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 MTHFD1P11586 935 aaKnown RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 TFEBP19484 476 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 MRPS5P82675 430 aaKnown RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 PPP3CAQ08209 521 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 CDC20Q12834 499 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 IFRD2Q12894 506 aaPredicted RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 MAB21L1Q13394 359 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 DSG2Q14126 1118 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 HEATR6Q6AI08 1181 aaKnown RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 PRMT9Q6P2P2 845 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 TRMT10BQ6PF06 316 aaKnown RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 STRA8Q7Z7C7 330 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 IGDCC3Q8IVU1 814 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 FBXW5Q969U6 566 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 TP53INP1Q96A56 240 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 ZUFSPQ96AP4 578 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF669Q96BR6 464 aaPredicted RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 GIMAP5Q96F15 307 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 PDCD10Q9BUL8 212 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 NGRNQ9NPE2 291 aaKnown RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 NECTIN3Q9NQS3 549 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF358Q9NW07 568 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 TMOD3Q9NYL9 352 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 DUX4Q9UBX2 424 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 AFG3L2Q9Y4W6 797 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 PCDHGB6Q9Y5F9 930 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 G3V2T6 193 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 HNRNPDLO14979 420 aaKnown RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 MUSKO15146 869 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 XPNPEP2O43895 674 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 HUS1O60921 280 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 PSIP1O75475 530 aaKnown RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 ATP6AP2O75787 350 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 NDUFB10O96000 172 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 MLLT10P55197 1068 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 ERVK-21P61565 698 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 TARDBPQ13148 414 aaKnown RBP eCLIP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 SIM2Q14190 667 aaPredicted RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 FAM83EQ2M2I3 478 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 SLC36A3Q495N2 470 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 AKIRIN2Q53H80 203 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 ARL13AQ5H913 290 aaPredicted RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 FAM209BQ5JX69 171 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 FAM92BQ6ZTR7 304 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 NRARPQ7Z6K4 114 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF677Q86XU0 584 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 PLCZ1Q86YW0 608 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 FAM71AQ8IYT1 594 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 FBXO30Q8TB52 745 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 ITFG1Q8TB96 612 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 TANKQ92844 425 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 DCAF5Q96JK2 942 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 RIPOR3Q96MK2 946 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 EIF2AK1Q9BQI3 630 aaKnown RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 CEP41Q9BYV8 373 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 TNKS2Q9H2K2 1166 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 MOCS1Q9NZB8 636 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 COPZ2Q9P299 210 aa7.38□□□□□ -1.23
PDE6A-205ENST00000617647 COPG1Q9Y678 874 aaKnown RBP7.38□□□□□ -1.23
PDE6A-205ENST00000617647 hCG_1984214I3L0E3 225 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ENPP3O14638 875 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 PLA2G6O60733 806 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF780AO75290 641 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 UGT2B11O75310 529 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ERN1O75460 977 aaKnown RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 TADA2AO75478 443 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 RFPL1O75677 317 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 SEC14L2O76054 403 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 SLITRK3O94933 977 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 APOA4P06727 396 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 POLBP06746 335 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 CYP2A6P11509 494 aaPredicted RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 TCF4P15884 667 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 ZNF3P17036 446 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 NAGAP17050 411 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 C4BPBP20851 252 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 TIE1P35590 1138 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 EIF2DP41214 584 aaKnown RBP7.37□□□□□ -1.23
PDE6A-205ENST00000617647 DGKQP52824 942 aa7.37□□□□□ -1.23
PDE6A-205ENST00000617647 NRLP54845 237 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms