RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 WT1P19544 449 aaPredicted RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 MCM3P25205 808 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 IGFALSP35858 605 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 EIF4A3P38919 411 aaKnown RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 MAPK10P53779 464 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 SH3BGRP55822 239 aaPredicted RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 SNRPD1P62314 119 aaKnown RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 ARF5P84085 180 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 ATP11AP98196 1134 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 RAD51Q06609 339 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 EIF3IQ13347 325 aaKnown RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 UBAP2LQ14157 1087 aaKnown RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 CLCA4Q14CN2 919 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 BOLA3Q53S33 107 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 FIGNQ5HY92 759 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 EFHC2Q5JST6 749 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 ACAD10Q6JQN1 1059 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 CCBE1Q6UXH8 406 aaPredicted RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 RD3Q7Z3Z2 195 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 IRF2BP2Q7Z5L9 587 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 HID1Q8IV36 788 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 NDUFAF2Q8N183 169 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 UMODL1-AS1Q8N2C9 162 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 EMC1Q8N766 993 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 ARL10Q8N8L6 244 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 DENND6BQ8NEG7 585 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 OR2AP1Q8NGE2 309 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 PCDH19Q8TAB3 1148 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 SLC30A5Q8TAD4 765 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 UHMK1Q8TAS1 419 aaKnown RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 FAM172AQ8WUF8 416 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 SLC20A1Q8WUM9 679 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 SCG3Q8WXD2 468 aaKnown RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 JPH3Q8WXH2 748 aaPredicted RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 TSACCQ96A04 125 aaPredicted RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 CENPTQ96BT3 561 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 TBATAQ96M53 351 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 RUFY1Q96T51 708 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 PCDHB18PQ96TA0 734 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 C11orf70Q9BRQ4 267 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 SYT11Q9BT88 431 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 CAPS2Q9BXY5 557 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 HSD3B7Q9H2F3 369 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 PCDH18Q9HCL0 1135 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 KCND1Q9NSA2 647 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 PARVAQ9NVD7 372 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 TRMT1Q9NXH9 659 aaKnown RBP8.6□□□□□ -1.03
GPC6-202ENST00000617456 AIPL1Q9NZN9 384 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 GPR34Q9UPC5 381 aa8.6□□□□□ -1.03
GPC6-202ENST00000617456 A0A1W2PQM1 296 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 KRIT1O00522 736 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 EPHB6O15197 1021 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 NVLO15381 856 aaKnown RBP8.59□□□□□ -1.03
GPC6-202ENST00000617456 CD160O95971 181 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 UGT2B4P06133 528 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 ETV5P41161 510 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 PRKCIP41743 596 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 RANBP1P43487 201 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 HCAR3P49019 387 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 KLK7P49862 253 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 NDST2P52849 883 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 YPEL5P62699 121 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 TYRO3Q06418 890 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 SKIDA1Q1XH10 827 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 C15orf59Q2T9L4 293 aaPredicted RBP8.59□□□□□ -1.03
GPC6-202ENST00000617456 MYLK3Q32MK0 819 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 C2CD6Q53TS8 623 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 ZNF805Q5CZA5 627 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 AGAP9Q5VTM2 703 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 PLEKHA7Q6IQ23 1121 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 RWDD4Q6NW29 188 aaKnown RBP8.59□□□□□ -1.03
GPC6-202ENST00000617456 DNAJC24Q6P3W2 148 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 MACC1Q6ZN28 852 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 CCNJLQ8IV13 435 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 MCOLN2Q8IZK6 566 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 RTL3Q8N8U3 475 aaKnown RBP8.59□□□□□ -1.03
GPC6-202ENST00000617456 JOSD2Q8TAC2 188 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 CXorf40AQ8TE69 158 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 HTR3CQ8WXA8 447 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 UBXN4Q92575 508 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 USP7Q93009 1102 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 TMEM74Q96NL1 305 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 SEMA3CQ99985 751 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 TTYH3Q9C0H2 523 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 SLC25A18Q9H1K4 315 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 LRRN3Q9H3W5 708 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 MBNL1Q9NR56 388 aaKnown RBP8.59□□□□□ -1.03
GPC6-202ENST00000617456 FOXJ2Q9P0K8 574 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 CORO1CQ9ULV4 474 aaPredicted RBP8.59□□□□□ -1.03
GPC6-202ENST00000617456 NEU3Q9UQ49 428 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 PCDHB11Q9Y5F2 797 aa8.59□□□□□ -1.03
GPC6-202ENST00000617456 BZW2Q9Y6E2 419 aaKnown RBP8.59□□□□□ -1.03
GPC6-202ENST00000617456 USP9YO00507 2555 aaPredicted RBP8.59□□□□□ -1.03
GPC6-202ENST00000617456 SPTBN1Q01082 2364 aaKnown RBP8.58□□□□□ -1.04
GPC6-202ENST00000617456 BSNQ9UPA5 3926 aa8.58□□□□□ -1.04
GPC6-202ENST00000617456 GOLGA6L10A0A0M3HER8 536 aa8.58□□□□□ -1.04
GPC6-202ENST00000617456 AREL1O15033 823 aa8.58□□□□□ -1.04
GPC6-202ENST00000617456 ZNF189O75820 626 aaPredicted RBP8.58□□□□□ -1.04
GPC6-202ENST00000617456 TM7SF2O76062 418 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms