RNA–Protein interactions for RNA: ENST00000615525.1

NCAM1-223, Transcript of neural cell adhesion molecule 1, human

TSL 5

Gene NCAM1, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-223	ENST00000615525	RAP1GDS1	P52306	607 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	ALDH18A1	P54886	795 aa	Known RBP	11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	HERVK_113	P63132	956 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	LMAN2	Q12907	356 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	NAPRT	Q6XQN6	538 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	ISCA2	Q86U28	154 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	LONP2	Q86WA8	852 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	BBS7	Q8IWZ6	715 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	RAVER1	Q8IY67	606 aa	Known RBP	11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	RBFA	Q8N0V3	343 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	KIF2B	Q8N4N8	673 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	CPSF7	Q8N684	471 aa	Known RBP	11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	PAF1	Q8N7H5	531 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	MDGA1	Q8NFP4	955 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	DTX3L	Q8TDB6	740 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	SH3RF2	Q8TEC5	729 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	POF1B	Q8WVV4	589 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	WBP2	Q969T9	261 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	PDLIM5	Q96HC4	596 aa	Known RBP	11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	LRIG1	Q96JA1	1093 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	EXOC2	Q96KP1	924 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	CCT7	Q99832	543 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	ERVK-6	Q9BXR3	956 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	SLC46A2	Q9BY10	475 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	DCLRE1B	Q9H816	532 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	ZFYVE1	Q9HBF4	777 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	TDP1	Q9NUW8	608 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	PNPO	Q9NVS9	261 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	KLHL42	Q9P2K6	505 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	BCAP29	Q9UHQ4	241 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	TRMT6	Q9UJA5	497 aa	Known RBP	11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	CRYL1	Q9Y2S2	319 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	PPIL1	Q9Y3C6	166 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	SPO11	Q9Y5K1	396 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	PCNT	O95613	3336 aa		11.78	□□□□□ -0.52
NCAM1-223	ENST00000615525	UBA6	A0AVT1	1052 aa	Predicted RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525		B2RBV5	119 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525		E5RI56	91 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	EIF3F	O00303	357 aa	Predicted RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	PRMT5	O14744	637 aa	Predicted RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	VPS4B	O75351	444 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	POP4	O95707	220 aa	Known RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	ASL	P04424	464 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	ENO1	P06733	434 aa	Known RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	FGF4	P08620	206 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	RECQL	P46063	649 aa	Predicted RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	RGS4	P49798	205 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	INHBC	P55103	352 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	IL2	P60568	153 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	MXRA7	P84157	204 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	DLG1	Q12959	904 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	TRMT5	Q32P41	509 aa	Known RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	HSF5	Q4G112	596 aa	Predicted RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	PITRM1	Q5JRX3	1037 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	METTL2B	Q6P1Q9	378 aa	Known RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	FRMD7	Q6ZUT3	714 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	USP45	Q70EL2	814 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	SNX20	Q7Z614	316 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	UBE2Q1	Q7Z7E8	422 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	HS6ST3	Q8IZP7	471 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	AHI1	Q8N157	1196 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	CCNYL1	Q8N7R7	359 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	TXNDC5	Q8NBS9	432 aa	Known RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	RP9	Q8TA86	221 aa	Known RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	SPPL3	Q8TCT6	385 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	GRIN3A	Q8TCU5	1115 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	HCAR2	Q8TDS4	363 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	ACTRT2	Q8TDY3	377 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	WFIKKN2	Q8TEU8	576 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	PIH1D2	Q8WWB5	315 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	BAD	Q92934	168 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	ULK4	Q96C45	1275 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	MAEL	Q96JY0	434 aa	Known RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	EBF4	Q9BQW3	602 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	C1QTNF3	Q9BXJ4	246 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	MRPL40	Q9NQ50	206 aa	Known RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	TAS2R1	Q9NYW7	299 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	GNPTG	Q9UJJ9	305 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	FCF1	Q9Y324	198 aa	Known RBP	11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	KCTD3	Q9Y597	815 aa		11.77	□□□□□ -0.53
NCAM1-223	ENST00000615525	TTC24	A2A3L6	582 aa	Predicted RBP	11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	AURKA	O14965	403 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	CCL16	O15467	120 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	TM7SF2	O76062	418 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	PAPLN	O95428	1278 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	PDHA1	P08559	390 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	SPATA31D3	P0C874	917 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	PABPC1	P11940	636 aa	Known RBP	11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	ZNF30	P17039	623 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	PGM1	P36871	562 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	CDKN2D	P55273	166 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	ERVFC1	P60507	584 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	USP4	Q13107	963 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	ZNF460	Q14592	562 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	PTPRN	Q16849	979 aa		11.76	□□□□□ -0.53
NCAM1-223	ENST00000615525	TTLL9	Q3SXZ7	439 aa		11.76	□□□□□ -0.53

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