RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 KLK6Q92876 244 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 HDAC10Q969S8 669 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 BIRC7Q96CA5 298 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 AP2M1Q96CW1 435 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 CFAP36Q96G28 342 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 TBATAQ96M53 351 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 LENG8Q96PV6 779 aaPredicted RBP14.66□□□□□ -0.06
CD48-203ENST00000613788 ABCG8Q9H221 673 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 SLC2A6Q9UGQ3 507 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 DMTF1Q9Y222 760 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 CACNA1IQ9P0X4 2223 aa14.66□□□□□ -0.06
CD48-203ENST00000613788 GLYATL1P3A0A0U1RQE8 302 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 SLC31A1O15431 190 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 SPAG6O75602 509 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 IGHV4-34P06331 123 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 PYGLP06737 847 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 TSHRP16473 764 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 BCKDHBP21953 392 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 DPTQ07507 201 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 CRYMQ14894 314 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 STEAP4Q687X5 459 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 KIAA0930Q6ICG6 404 aaPredicted RBP14.65□□□□□ -0.06
CD48-203ENST00000613788 EMBQ6PCB8 327 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 UNC5AQ6ZN44 842 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 RFLNAQ6ZTI6 216 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 C3orf62Q6ZUJ4 267 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 TRMT10CQ7L0Y3 403 aaKnown RBP14.65□□□□□ -0.06
CD48-203ENST00000613788 LPCAT2Q7L5N7 544 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 ZBTB44Q8NCP5 570 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 OR6P1Q8NGX9 317 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 C9orf72Q96LT7 481 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 FCRL3Q96P31 734 aaPredicted RBP14.65□□□□□ -0.06
CD48-203ENST00000613788 PRRX2Q99811 253 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 WDR83Q9BRX9 315 aaKnown RBP14.65□□□□□ -0.06
CD48-203ENST00000613788 LRFN3Q9BTN0 628 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 SPATA16Q9BXB7 569 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 DUSP15Q9H1R2 295 aaPredicted RBP14.65□□□□□ -0.06
CD48-203ENST00000613788 IL26Q9NPH9 171 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 CD84Q9UIB8 345 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 FKBPLQ9UIM3 349 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 FNDC3AQ9Y2H6 1198 aaKnown RBP14.65□□□□□ -0.06
CD48-203ENST00000613788 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.65□□□□□ -0.06
CD48-203ENST00000613788 PCDHGA2Q9Y5H1 932 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 SLC30A1Q9Y6M5 507 aa14.65□□□□□ -0.06
CD48-203ENST00000613788 ZCWPW2A0A1B0GU75 182 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 ERLIN1O75477 346 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 VAPBO95292 243 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 HNRNPA2B1P22626 353 aaKnown RBP14.64□□□□□ -0.07
CD48-203ENST00000613788 AKT2P31751 481 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 PHBP35232 272 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 ARSDP51689 593 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 PMS2P54278 862 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 ITGA9Q13797 1035 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 FGL2Q14314 439 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 KYNUQ16719 465 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 LONRF1Q17RB8 773 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 HENMT1Q5T8I9 393 aaKnown RBP14.64□□□□□ -0.07
CD48-203ENST00000613788 ALS2CLQ60I27 953 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 PDPK2PQ6A1A2 396 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 TRAM1L1Q8N609 369 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 DENND6BQ8NEG7 585 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 GABPB2Q8TAK5 448 aaPredicted RBP14.64□□□□□ -0.07
CD48-203ENST00000613788 GSDMBQ8TAX9 411 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 SCAMP4Q969E2 229 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 CENPTQ96BT3 561 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 SGSM3Q96HU1 749 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 TRIM56Q9BRZ2 755 aaKnown RBP14.64□□□□□ -0.07
CD48-203ENST00000613788 ZSCAN5AQ9BUG6 496 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 RIOK2Q9BVS4 552 aaKnown RBP14.64□□□□□ -0.07
CD48-203ENST00000613788 CDC42EP4Q9H3Q1 356 aaKnown RBP14.64□□□□□ -0.07
CD48-203ENST00000613788 LRRC4CQ9HCJ2 640 aa14.64□□□□□ -0.07
CD48-203ENST00000613788 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.64□□□□□ -0.07
CD48-203ENST00000613788 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 A0A1W2PPC4 97 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 CCDC162PA2VCL2 907 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 MEI4A8MW99 385 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 PRAMEF26H0Y7S4 382 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 CCL22O00626 93 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 HRO43593 1189 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 SRP72O76094 671 aaKnown RBP14.63□□□□□ -0.07
CD48-203ENST00000613788 PRAMEF1O95521 474 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 MC4RP32245 332 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 XIAPP98170 497 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 PEX6Q13608 980 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 FRG1Q14331 258 aaKnown RBP14.63□□□□□ -0.07
CD48-203ENST00000613788 BRD3Q15059 726 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 WSCD2Q2TBF2 565 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 GPR33Q49SQ1 333 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 WDR45BQ5MNZ6 344 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 AFTPHQ6ULP2 937 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 FAM151BQ6UXP7 276 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 CYS1Q717R9 158 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 CEP68Q76N32 757 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 TMEFF1Q8IYR6 380 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 DEFB119Q8N690 84 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 TP53I13Q8NBR0 393 aaPredicted RBP14.63□□□□□ -0.07
CD48-203ENST00000613788 OR4L1Q8NH43 312 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 ZNF398Q8TD17 642 aa14.63□□□□□ -0.07
CD48-203ENST00000613788 AENQ8WTP8 325 aaKnown RBP14.63□□□□□ -0.07
CD48-203ENST00000613788 SNX19Q92543 992 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms