RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CDKAL1Q5VV42 579 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 HIST2H2BCQ6DN03 193 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 RAET1GQ6H3X3 334 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 NRSN1Q8IZ57 195 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 PDCD6IPQ8WUM4 868 aaKnown RBP23.34■■□□□ 1.33
MMP28-203ENST00000612672 ABHD17AQ96GS6 310 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 TRIM7Q9C029 511 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 GOLGA6AQ9NYA3 693 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 PCSK1NQ9UHG2 260 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 CD84Q9UIB8 345 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 MYO9AB2RTY4 2548 aa23.34■■□□□ 1.33
MMP28-203ENST00000612672 A8MU76 341 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 K7EM74 188 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 BIRC2Q13490 618 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 RFTN1Q14699 578 aaPredicted RBP23.33■■□□□ 1.33
MMP28-203ENST00000612672 LBRQ14739 615 aaKnown RBP23.33■■□□□ 1.33
MMP28-203ENST00000612672 SNAP47Q5SQN1 464 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 DCAF12Q5T6F0 453 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 TECPR1Q7Z6L1 1165 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 MCOLN2Q8IZK6 566 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 CCDC112Q8NEF3 446 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 CATSPER2Q96P56 530 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 PSMG3-AS1Q96PY0 264 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 AGPAT1Q99943 283 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 ASPSCR1Q9BZE9 553 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 GPN2Q9H9Y4 310 aaPredicted RBP23.33■■□□□ 1.33
MMP28-203ENST00000612672 NOD2Q9HC29 1040 aa23.33■■□□□ 1.33
MMP28-203ENST00000612672 MRPS18BQ9Y676 258 aaKnown RBP23.33■■□□□ 1.33
MMP28-203ENST00000612672 DEFB109BQ30KR1 87 aa23.32■■□□□ 1.32
MMP28-203ENST00000612672 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.32■■□□□ 1.32
MMP28-203ENST00000612672 TMCO4Q5TGY1 634 aa23.32■■□□□ 1.32
MMP28-203ENST00000612672 MARK2Q7KZI7 788 aaKnown RBP23.32■■□□□ 1.32
MMP28-203ENST00000612672 ARHGAP22Q7Z5H3 698 aa23.32■■□□□ 1.32
MMP28-203ENST00000612672 OR2M4Q96R27 311 aa23.32■■□□□ 1.32
MMP28-203ENST00000612672 AGAP2Q99490 1192 aa23.32■■□□□ 1.32
MMP28-203ENST00000612672 ETNK2Q9NVF9 386 aa23.32■■□□□ 1.32
MMP28-203ENST00000612672 MAP3K6O95382 1288 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 NTRK1P04629 796 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 CTPS1P17812 591 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 TEAD1P28347 426 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 FASLGP48023 281 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 RAB15P59190 212 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 MAXP61244 160 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 MC2RQ01718 297 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 DPYSQ14117 519 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 SYCP1Q15431 976 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 PYCR3Q53H96 274 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 DCUN1D2Q6PH85 259 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 NLGN4XQ8N0W4 816 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 NLGN4YQ8NFZ3 816 aaPredicted RBP23.31■■□□□ 1.32
MMP28-203ENST00000612672 MIB2Q96AX9 1013 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 MCCC1Q96RQ3 725 aaPredicted RBP23.31■■□□□ 1.32
MMP28-203ENST00000612672 ABCG8Q9H221 673 aa23.31■■□□□ 1.32
MMP28-203ENST00000612672 CWC15Q9P013 229 aaKnown RBP23.31■■□□□ 1.32
MMP28-203ENST00000612672 PRRC2CQ9Y520 2896 aaKnown RBP23.31■■□□□ 1.32
MMP28-203ENST00000612672 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.3■■□□□ 1.32
MMP28-203ENST00000612672 BLACEA4D250 179 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 ANKRD62A6NC57 917 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 SOCS5O75159 536 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 DLGAP3O95886 979 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 F8A1P23610 371 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 PSMA2P25787 234 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 GPLD1P80108 840 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 NCAPHQ15003 741 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 PPP6R3Q5H9R7 873 aaPredicted RBP23.3■■□□□ 1.32
MMP28-203ENST00000612672 ERMARDQ5T6L9 678 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 SFRP1Q8N474 314 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 STARD8Q92502 1023 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 SCAMP4Q969E2 229 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 NUDCD1Q96RS6 583 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 ZMYND15Q9H091 742 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 ITPR2Q14571 2701 aa23.3■■□□□ 1.32
MMP28-203ENST00000612672 ZW10O43264 779 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 DAPK3O43293 454 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 MTSS1O43312 755 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 MAMLD1Q13495 774 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 IHHQ14623 411 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 ACAD10Q6JQN1 1059 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 FAM26EQ8N5C1 309 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 DPYSL5Q9BPU6 564 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 MGME1Q9BQP7 344 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 SYT11Q9BT88 431 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 DONSONQ9NYP3 566 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 PHTF1Q9UMS5 762 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 TP53TG5Q9Y2B4 290 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 PRKAB1Q9Y478 270 aa23.29■■□□□ 1.32
MMP28-203ENST00000612672 TMEM184BQ9Y519 407 aaPredicted RBP23.29■■□□□ 1.32
MMP28-203ENST00000612672 TNRC6AQ8NDV7 1962 aaKnown RBP23.29■■□□□ 1.32
MMP28-203ENST00000612672 PRR19A6NJB7 356 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 PSMD11O00231 422 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 CAPN5O15484 640 aaPredicted RBP23.28■■□□□ 1.32
MMP28-203ENST00000612672 STK17BO94768 372 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 PGLSO95336 258 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 PDHA1P08559 390 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 MAP4P27816 1152 aaKnown RBP23.28■■□□□ 1.32
MMP28-203ENST00000612672 MIPP30301 263 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 GPR1P46091 355 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 RENBPP51606 427 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 DPTQ07507 201 aa23.28■■□□□ 1.32
MMP28-203ENST00000612672 ZNF235Q14590 738 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms