RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 BRD8Q9H0E9 1235 aa18.05■□□□□ 0.48
CCDC12-208ENST00000603885 TRNAU1APQ9NX07 287 aaKnown RBP18.05■□□□□ 0.48
CCDC12-208ENST00000603885 SUFUQ9UMX1 484 aa18.05■□□□□ 0.48
CCDC12-208ENST00000603885 SATB2Q9UPW6 733 aa18.05■□□□□ 0.48
CCDC12-208ENST00000603885 SLC17A4Q9Y2C5 497 aa18.05■□□□□ 0.48
CCDC12-208ENST00000603885 CASC3O15234 703 aaKnown RBP18.04■□□□□ 0.48
CCDC12-208ENST00000603885 NOBOXO60393 691 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 LCA5LO95447 670 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 CLDN7O95471 211 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 SOD1P00441 154 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 RPLP0P05388 317 aaKnown RBP18.04■□□□□ 0.48
CCDC12-208ENST00000603885 IVLP07476 585 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 ITPKBP27987 946 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 PCBP4P57723 403 aaKnown RBP18.04■□□□□ 0.48
CCDC12-208ENST00000603885 ERVPABLB-1P60509 514 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 TFDP2Q14188 446 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 SPA17Q15506 151 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 QPCTQ16769 361 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 DOK6Q6PKX4 331 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 MFSD7Q6UXD7 560 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 BZW1Q7L1Q6 419 aaKnown RBP18.04■□□□□ 0.48
CCDC12-208ENST00000603885 CCDC170Q8IYT3 715 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 MLPHQ9BV36 600 aaPredicted RBP18.04■□□□□ 0.48
CCDC12-208ENST00000603885 CEP41Q9BYV8 373 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 LUC7LQ9NQ29 371 aaKnown RBP18.04■□□□□ 0.48
CCDC12-208ENST00000603885 THSD1Q9NS62 852 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 SEPT10Q9P0V9 454 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 APPL1Q9UKG1 709 aa18.04■□□□□ 0.48
CCDC12-208ENST00000603885 C1orf232A0A0U1RR37 186 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 ANKRD66B4E2M5 251 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 D6RAR5 112 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 FUCA1P04066 466 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 PNLIPP16233 465 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 RBMS1P29558 406 aaKnown RBP18.03■□□□□ 0.48
CCDC12-208ENST00000603885 CYLC1P35663 651 aaPredicted RBP18.03■□□□□ 0.48
CCDC12-208ENST00000603885 CDKN2BP42772 138 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 POLD2P49005 469 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 NR2C2P49116 596 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 PDX1P52945 283 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 CCL7P80098 99 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 PEX6Q13608 980 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 HLTFQ14527 1009 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCDC12-208ENST00000603885 IGF2-ASQ6U949 168 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 NT5DC3Q86UY8 548 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 CCNJLQ8IV13 435 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 ZNF248Q8NDW4 579 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 WDR36Q8NI36 951 aaKnown RBP18.03■□□□□ 0.48
CCDC12-208ENST00000603885 CCHCR1Q8TD31 782 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 PTCD2Q8WV60 388 aaKnown RBP18.03■□□□□ 0.48
CCDC12-208ENST00000603885 IMP4Q96G21 291 aaKnown RBP18.03■□□□□ 0.48
CCDC12-208ENST00000603885 HIC2Q96JB3 615 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 AGAP3Q96P47 875 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 RIOK2Q9BVS4 552 aaKnown RBP18.03■□□□□ 0.48
CCDC12-208ENST00000603885 CDH19Q9H159 772 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 LRRN3Q9H3W5 708 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 PKD2L2Q9NZM6 624 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 TAAR2Q9P1P5 351 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 PCDHGA8Q9Y5G5 932 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 PCDHA13Q9Y5I0 950 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 ALG6Q9Y672 507 aa18.03■□□□□ 0.48
CCDC12-208ENST00000603885 ARHGEF17Q96PE2 2063 aaPredicted RBP18.02■□□□□ 0.48
CCDC12-208ENST00000603885 CCDC187A0A096LP49 1063 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 A0A1W2PQM1 296 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 TMX2-CTNND1H3BSU7 103 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 NUDT21O43809 227 aaKnown RBP18.02■□□□□ 0.48
CCDC12-208ENST00000603885 CCDC173Q0VFZ6 552 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 TAZQ16635 292 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 SLC30A9Q6PML9 568 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 IGSF10Q6WRI0 2623 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 NRROSQ86YC3 692 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 SFTPA2Q8IWL1 248 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 Q8N9G6 341 aaPredicted RBP18.02■□□□□ 0.48
CCDC12-208ENST00000603885 EXD1Q8NHP7 514 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 ZDHHC1Q8WTX9 485 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 SCARF2Q96GP6 870 aaPredicted RBP18.02■□□□□ 0.48
CCDC12-208ENST00000603885 OR2M4Q96R27 311 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 AGAP2Q99490 1192 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 SLC25A51Q9H1U9 297 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 GOLPH3Q9H4A6 298 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 ASCL3Q9NQ33 180 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 SPATS2LQ9NUQ6 558 aaKnown RBP18.02■□□□□ 0.48
CCDC12-208ENST00000603885 LRIT1Q9P2V4 623 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 TMEM98Q9Y2Y6 226 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 RNF215Q9Y6U7 377 aa18.02■□□□□ 0.48
CCDC12-208ENST00000603885 A0A0A6YYK5 440 aaPredicted RBP18.01■□□□□ 0.47
CCDC12-208ENST00000603885 A0A1W2PNU3 283 aaPredicted RBP18.01■□□□□ 0.47
CCDC12-208ENST00000603885 RGSL1A5PLK6 1076 aa18.01■□□□□ 0.47
CCDC12-208ENST00000603885 INPP4BO15327 924 aa18.01■□□□□ 0.47
CCDC12-208ENST00000603885 CST8O60676 142 aa18.01■□□□□ 0.47
CCDC12-208ENST00000603885 AK4P27144 223 aaPredicted RBP18.01■□□□□ 0.47
CCDC12-208ENST00000603885 ADCY8P40145 1251 aa18.01■□□□□ 0.47
CCDC12-208ENST00000603885 SPINT3P49223 89 aa18.01■□□□□ 0.47
CCDC12-208ENST00000603885 ZNF75DP51815 510 aa18.01■□□□□ 0.47
CCDC12-208ENST00000603885 CTBSQ01459 385 aa18.01■□□□□ 0.47
CCDC12-208ENST00000603885 GALNT3Q14435 633 aa18.01■□□□□ 0.47
CCDC12-208ENST00000603885 SLC14A2Q15849 920 aa18.01■□□□□ 0.47
CCDC12-208ENST00000603885 TFDP3Q5H9I0 405 aa18.01■□□□□ 0.47
CCDC12-208ENST00000603885 KAZNQ674X7 775 aa18.01■□□□□ 0.47
CCDC12-208ENST00000603885 FOXR1Q6PIV2 292 aa18.01■□□□□ 0.47
CCDC12-208ENST00000603885 SPOCD1Q6ZMY3 1216 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms