RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 SMPD3Q9NY59 655 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 PLLPQ9Y342 182 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 FPGTO14772 594 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 TSPAN4O14817 238 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 RFTN2Q52LD8 501 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 DSELQ8IZU8 1212 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 GJD3Q8N144 294 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 LGMNQ99538 433 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 TNKS2Q9H2K2 1166 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 U3KQV3 271 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 CEP170BQ9Y4F5 1589 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 GOT1P17174 413 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 RPL22P35268 128 aaKnown RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ALDH3A2P51648 485 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 LDLRAP1Q5SW96 308 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 BBS12Q6ZW61 710 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 CLNKQ7Z7G1 428 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ZNF557Q8N988 423 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 TTYH1Q9H313 450 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ABCB9Q9NP78 766 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 KCNQ5Q9NR82 932 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 XPR1Q9UBH6 696 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 TRAF6Q9Y4K3 522 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 LPOP22079 712 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 DUPD1Q68J44 220 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 FAM151BQ6UXP7 276 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 TRABD2AQ86V40 505 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ADCY4Q8NFM4 1077 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ARL8BQ9NVJ2 186 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ZNF180Q9UJW8 692 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ATP6AP2A0A1C7CYW4 349 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 TEX46H3BTG2 121 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 WRBO00258 174 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ATP6AP2O75787 350 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 RSL1D1O76021 490 aaKnown RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 FGF1P05230 155 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ATF6P18850 670 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 AZGP1P25311 298 aaKnown RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 PRKCIP41743 596 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ABRQ12979 859 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 CPSF6Q16630 551 aaKnown RBP eCLIP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 FAAH2Q6GMR7 532 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 SENP8Q96LD8 212 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 EXD2Q9NVH0 621 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 SLC17A7Q9P2U7 560 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 PTPRMP28827 1452 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ZNF432O94892 652 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 CALCAP01258 141 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ATF4P18848 351 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 OR8H1Q8NGG4 311 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ZBTB45Q96K62 511 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ULBP1Q9BZM6 244 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 POLLQ9UGP5 575 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 MFHAS1Q9Y4C4 1052 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 DIP2BQ9P265 1576 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 CTBP1Q13363 440 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 RNF220Q5VTB9 566 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 OR8H3Q8N146 312 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 SUSD6Q92537 303 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 MAP10Q9P2G4 905 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 ATP5C1P36542 298 aaKnown RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 TUFMP49411 452 aaKnown RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 EXO5Q9H790 373 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 PDP1Q9P0J1 537 aaPredicted RBP9.59□□□□□ -0.87
CSMD1-217ENST00000602723 SEC14L3Q9UDX4 400 aa9.59□□□□□ -0.87
CSMD1-217ENST00000602723 A0A0J9YYE9 177 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 ORC5O43913 435 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 GIMD1P0DJR0 217 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 POLR2JP52435 117 aaKnown RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 ATN1P54259 1190 aaPredicted RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 FAM92BQ6ZTR7 304 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 GPR180Q86V85 440 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 MAP4K3Q8IVH8 894 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 SKA1Q96BD8 255 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 SNRNP25Q9BV90 132 aaKnown RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 RIMS1Q86UR5 1692 aaKnown RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 hCG_1818297A0A087WSY0 165 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 PGRP06401 933 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 BPGMP07738 259 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 DLG1Q12959 904 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 MIIPQ5JXC2 388 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 HM13Q8TCT9 377 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 HOPXQ9BPY8 73 aaPredicted RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 NXF3Q9H4D5 531 aaKnown RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 RHOJQ9H4E5 214 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 IL17RBQ9NRM6 502 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 PCDHGA10Q9Y5H3 936 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 SPEF2Q9C093 1822 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 GSC2O15499 205 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 BUD23O43709 281 aaKnown RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 PIRTP0C851 137 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 OGNP20774 298 aaKnown RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 PTGS2P35354 604 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 ELP6Q0PNE2 266 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 GCNT6Q5T4J0 391 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 SWT1Q5T5J6 900 aaKnown RBP9.58□□□□□ -0.88
CSMD1-217ENST00000602723 TAPT1Q6NXT6 567 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 GALNTL5Q7Z4T8 443 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 CLHC1Q8NHS4 586 aa9.58□□□□□ -0.88
CSMD1-217ENST00000602723 TAMM41Q96BW9 452 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms