RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 HERC2P3Q9BVR0 1158 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 RIOX1Q9H6W3 641 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 MKLN1Q9UL63 735 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 PEX16Q9Y5Y5 336 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 MOXD2PA6NHM9 499 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 AIREO43918 545 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 CRYZL1O95825 349 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 LINC00032P0C843 101 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 NT5DC1Q5TFE4 455 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 SYT12Q8IV01 421 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 DSELQ8IZU8 1212 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 GHDCQ8N2G8 530 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF318Q5VUA4 2279 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ILVBLA1L0T0 632 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 OMPP47874 163 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 IL2P60568 153 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 AP5B1Q2VPB7 878 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF549Q6P9A3 640 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF517Q6ZMY9 492 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-216ENST00000602557 TNFRSF25Q93038 417 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 PTCD3Q96EY7 689 aaKnown RBP8.69□□□□□ -1.02
CSMD1-216ENST00000602557 SPATC1LQ9H0A9 340 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 OR56A5P0C7T3 313 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 CDH1P12830 882 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 BDNFP23560 247 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF268Q14587 947 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-216ENST00000602557 FAM187BQ17R55 369 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ETNPPLQ8TBG4 499 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 SLC35C1Q96A29 364 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ZFP14Q9HCL3 533 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 IL17RBQ9NRM6 502 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 FARSBQ9NSD9 589 aaKnown RBP8.69□□□□□ -1.02
CSMD1-216ENST00000602557 KLQ9UEF7 1012 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 HSPB11Q9Y547 144 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 A0A0B4J269 797 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 MID1O15344 667 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 CYP1A1P04798 512 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-216ENST00000602557 PRG2P13727 222 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 NFKB1P19838 968 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 NTSP30990 170 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ANKRD26P1Q6NSI1 321 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 NEPROQ6NW34 567 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 FBXO42Q6P3S6 717 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ZZZ3Q8IYH5 903 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 C7orf57Q8NEG2 295 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 COL26A1Q96A83 441 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 CRELD1Q96HD1 420 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 PPM1HQ9ULR3 514 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 PCDHB5Q9Y5E4 795 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 IGSF6O95976 241 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 NUDT17P0C025 328 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 GCNT1Q02742 428 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 SEC23AQ15436 765 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 SLC1A5Q15758 541 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ATP13A4Q4VNC1 1196 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 FNDC3BQ53EP0 1204 aaKnown RBP8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ACSBG2Q5FVE4 666 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ATL1Q8WXF7 558 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 BTBD9Q96Q07 612 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 IL22Q9GZX6 179 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 EBF2Q9HAK2 575 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 CCNB1IP1Q9NPC3 277 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 MARCH2Q9P0N8 246 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 GRIN2DO15399 1336 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ASTN2O75129 1339 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-216ENST00000602557 RPN2P04844 631 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 SLC18A2Q05940 514 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 SLC34A3Q8N130 599 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ASCC1Q8N9N2 400 aaKnown RBP8.69□□□□□ -1.02
CSMD1-216ENST00000602557 GPR156Q8NFN8 814 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 TNFAIP8L1Q8WVP5 186 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 KIDINS220Q9ULH0 1771 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 SNX4O95219 450 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 SLC26A2P50443 739 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 CXXC5Q7LFL8 322 aaKnown RBP8.69□□□□□ -1.02
CSMD1-216ENST00000602557 FAM220AQ7Z4H9 259 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ITM2CQ9NQX7 267 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 NTRK1P04629 796 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 HNRNPLP14866 589 aaKnown RBP eCLIP8.69□□□□□ -1.022e-7■■■■□ 19.3
CSMD1-216ENST00000602557 CDK9P50750 372 aaKnown RBP8.69□□□□□ -1.02
CSMD1-216ENST00000602557 TMPRSS11AQ6ZMR5 421 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 BEX2Q9BXY8 128 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 TKTL2Q9H0I9 626 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 PCDHA11Q9Y5I1 949 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 ANKRD26Q9UPS8 1709 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 H7C2Y5 167 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 PEX11AO75192 247 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 EPORP19235 508 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 RBL1P28749 1068 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 E2F2Q14209 437 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 TOR1AIP1Q5JTV8 583 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 VWA5B1Q5TIE3 1220 aa8.69□□□□□ -1.02
CSMD1-216ENST00000602557 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.69□□□□□ -1.02
CSMD1-216ENST00000602557 SMPD3Q9NY59 655 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-216ENST00000602557 H6PDO95479 791 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 RPS3P23396 243 aaKnown RBP eCLIP8.68□□□□□ -1.02
CSMD1-216ENST00000602557 IGFBP5P24593 272 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 PSMD5Q16401 504 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 WSCD2Q2TBF2 565 aa8.68□□□□□ -1.02
CSMD1-216ENST00000602557 EARS2Q5JPH6 523 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms