RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 NFS1Q9Y697 457 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 IGHV1OR15-9A0A0B4J2B8 117 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 A0A1W2PQU0 124 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 FAM159BA6NKW6 160 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 SLC7A4O43246 635 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 RNGTTO60942 597 aaKnown RBP22.86■■□□□ 1.25
IRF3-227ENST00000600911 MAT2AP31153 395 aaKnown RBP22.86■■□□□ 1.25
IRF3-227ENST00000600911 MC4RP32245 332 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 FOXN2P32314 431 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 CCR3P51677 355 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 CASP8Q14790 479 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 SKIDA1Q1XH10 827 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 MAP7D1Q3KQU3 841 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 TMEM259Q4ZIN3 620 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 PSAPL1Q6NUJ1 521 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 NLRP9Q7RTR0 991 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 DENND6AQ8IWF6 608 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 PIANPQ8IYJ0 282 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 DTD2Q96FN9 168 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 TOE1Q96GM8 510 aaKnown RBP22.86■■□□□ 1.25
IRF3-227ENST00000600911 SRPK1Q96SB4 655 aaKnown RBP22.86■■□□□ 1.25
IRF3-227ENST00000600911 C6orf106Q9H6K1 298 aaPredicted RBP22.86■■□□□ 1.25
IRF3-227ENST00000600911 IARS2Q9NSE4 1012 aaKnown RBP22.86■■□□□ 1.25
IRF3-227ENST00000600911 ARGLU1Q9NWB6 273 aaPredicted RBP22.86■■□□□ 1.25
IRF3-227ENST00000600911 NCKAP1Q9Y2A7 1128 aa22.86■■□□□ 1.25
IRF3-227ENST00000600911 H7C0S8 307 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 K7ESM1 405 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 TSPAN6O43657 245 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 FAM155BO75949 473 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 SASH3O75995 380 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 ABHD2P08910 425 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 TSHRP16473 764 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 UGT1A6P19224 532 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 UGT1A1P22309 533 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 UGT1A4P22310 534 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 UGT1A3P35503 534 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 UGT1A5P35504 534 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 CHRNA6Q15825 494 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 MAMSTRQ6ZN01 415 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 OR6P1Q8NGX9 317 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 PEX13Q92968 403 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 MRRFQ96E11 262 aaKnown RBP22.85■■□□□ 1.25
IRF3-227ENST00000600911 BTBD1Q9H0C5 482 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 EBF2Q9HAK2 575 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 PRMT8Q9NR22 394 aaPredicted RBP22.85■■□□□ 1.25
IRF3-227ENST00000600911 WSB2Q9NYS7 404 aaPredicted RBP22.85■■□□□ 1.25
IRF3-227ENST00000600911 MBD1Q9UIS9 605 aaPredicted RBP22.85■■□□□ 1.25
IRF3-227ENST00000600911 PLAAQ9Y263 795 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 ABCA7Q8IZY2 2146 aa22.85■■□□□ 1.25
IRF3-227ENST00000600911 TBC1D3DA0A087WVF3 549 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 TBC1D3IA0A087WXS9 549 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 TBC1D3EA0A087X179 549 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 TBC1D3KA0A087X1G2 549 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 TBC1D3FA6NER0 549 aaPredicted RBP22.84■■□□□ 1.25
IRF3-227ENST00000600911 TBC1D3LB9A6J9 549 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 SOD1P00441 154 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 TBC1D3HP0C7X1 549 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 SPAM1P38567 509 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 MAGEA9P43362 315 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 PRAMEP78395 509 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 CREB5Q02930 508 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 ZNF789Q5FWF6 425 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 TEDDM1Q5T9Z0 273 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 ARMC3Q5W041 872 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 TBC1D3GQ6DHY5 549 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 TBC1D3CQ6IPX1 549 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 SPNS2Q8IVW8 549 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 TBC1D3Q8IZP1 549 aaPredicted RBP22.84■■□□□ 1.25
IRF3-227ENST00000600911 CAMKK1Q8N5S9 505 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 ZIM3Q96PE6 472 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 IER2Q9BTL4 223 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 RIOK2Q9BVS4 552 aaKnown RBP22.84■■□□□ 1.25
IRF3-227ENST00000600911 ACSS3Q9H6R3 686 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 PPANQ9NQ55 473 aaKnown RBP22.84■■□□□ 1.25
IRF3-227ENST00000600911 PKD2L2Q9NZM6 624 aa22.84■■□□□ 1.25
IRF3-227ENST00000600911 FADS2P1A8MWK0 482 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 PSMD11O00231 422 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 DYNC1I1O14576 645 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 RAD51BO15315 384 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 GSTA2P09210 222 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 ABCG1P45844 678 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 PDE1BQ01064 536 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 CTBP1Q13363 440 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 FRG1Q14331 258 aaKnown RBP22.83■■□□□ 1.25
IRF3-227ENST00000600911 ZNF284Q2VY69 593 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 HENMT1Q5T8I9 393 aaKnown RBP22.83■■□□□ 1.25
IRF3-227ENST00000600911 IQCKQ8N0W5 287 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 PLA2G15Q8NCC3 412 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 NAT14Q8WUY8 206 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 FZD3Q9NPG1 666 aa22.83■■□□□ 1.25
IRF3-227ENST00000600911 MBNL1Q9NR56 388 aaKnown RBP22.83■■□□□ 1.25
IRF3-227ENST00000600911 A0A087WUV0 522 aaPredicted RBP22.82■■□□□ 1.24
IRF3-227ENST00000600911 GLYATL1P3A0A0U1RQE8 302 aa22.82■■□□□ 1.24
IRF3-227ENST00000600911 WNT9AO14904 365 aa22.82■■□□□ 1.24
IRF3-227ENST00000600911 LZTS3O60299 673 aaPredicted RBP22.82■■□□□ 1.24
IRF3-227ENST00000600911 SRP72O76094 671 aaKnown RBP22.82■■□□□ 1.24
IRF3-227ENST00000600911 PRAMEF1O95521 474 aa22.82■■□□□ 1.24
IRF3-227ENST00000600911 SEMA4FO95754 770 aa22.82■■□□□ 1.24
IRF3-227ENST00000600911 PAK4O96013 591 aaPredicted RBP22.82■■□□□ 1.24
IRF3-227ENST00000600911 NFKBIAP25963 317 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms