RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	TM9SF3	Q9HD45	589 aa		21.92	■■□□□ 1.1
LTBP4-227	ENST00000600026	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	21.92	■■□□□ 1.1
LTBP4-227	ENST00000600026	SUSD2	Q9UGT4	822 aa		21.92	■■□□□ 1.1
LTBP4-227	ENST00000600026	GON4L	Q3T8J9	2241 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026		A0A1B0GTW7	788 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	PRAMEF26	H0Y7S4	382 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	RAD51B	O15315	384 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	RECQL5	O94762	991 aa	Predicted RBP	21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	CLDN7	O95471	211 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	MYBL2	P10244	700 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	AKT2	P31751	481 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	STC1	P52823	247 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	MSLN	Q13421	630 aa	Predicted RBP	21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	ACOX1	Q15067	660 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	CCDC6	Q16204	474 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	MAP9	Q49MG5	647 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	CCNJL	Q8IV13	435 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	GSPT2	Q8IYD1	628 aa	Known RBP	21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	ZBED8	Q8IZ13	594 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	CBARP	Q8N350	705 aa	Predicted RBP	21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	TP53I13	Q8NBR0	393 aa	Predicted RBP	21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	DENND6B	Q8NEG7	585 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	STAMBPL1	Q96FJ0	436 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	KLF6	Q99612	283 aa	Predicted RBP	21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	NAT9	Q9BTE0	207 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	ZFYVE1	Q9HBF4	777 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	MRM3	Q9HC36	420 aa	Known RBP	21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	CA5B	Q9Y2D0	317 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	TCAF1	Q9Y4C2	921 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	VPS13A	Q96RL7	3174 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	PI4KA	P42356	2102 aa		21.91	■■□□□ 1.1
LTBP4-227	ENST00000600026	PCDH15	Q96QU1	1955 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	ADAMTS9	Q9P2N4	1935 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	GOLGA8CP	A6NN73	597 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	BCAT2	O15382	392 aa	Predicted RBP	21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	ERLIN1	O75477	346 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	BANF1	O75531	89 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	SLC4A1	P02730	911 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	GNS	P15586	552 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	ELK3	P41970	407 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	RACK1	P63244	317 aa	Known RBP	21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	CRADD	P78560	199 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	PTS	Q03393	145 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	AGER	Q15109	404 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	CCDC38	Q502W7	563 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	PLA2G2C	Q5R387	149 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	MPP5	Q8N3R9	675 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	TMEM145	Q8NBT3	493 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	PYROXD1	Q8WU10	500 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	LENG8	Q96PV6	779 aa	Predicted RBP	21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	EBNA1BP2	Q99848	306 aa	Known RBP	21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	C1QTNF7	Q9BXJ2	289 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	SMOC1	Q9H4F8	434 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	AASDHPPT	Q9NRN7	309 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	SOX13	Q9UN79	622 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	CHMP2B	Q9UQN3	213 aa		21.9	■■□□□ 1.1
LTBP4-227	ENST00000600026	PATE3	B3GLJ2	98 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	AURKA	O14965	403 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	LPO	P22079	712 aa	Predicted RBP	21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	IGFALS	P35858	605 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	ETV3	P41162	512 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	MAGEA4	P43358	317 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	BRD3	Q15059	726 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	IRF4	Q15306	451 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	EMB	Q6PCB8	327 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	LAYN	Q6UX15	382 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	GCNT7	Q6ZNI0	430 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	RFLNA	Q6ZTI6	216 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	RABEPK	Q7Z6M1	372 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	ANKMY2	Q8IV38	441 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	FBXO36	Q8NEA4	188 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	NUS1	Q96E22	293 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	DTD2	Q96FN9	168 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	KIFC1	Q9BW19	673 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	MBNL1	Q9NR56	388 aa	Known RBP	21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	TEX264	Q9Y6I9	313 aa		21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	ZNF106	Q9H2Y7	1883 aa	Known RBP	21.89	■■□□□ 1.09
LTBP4-227	ENST00000600026	TMEM131	Q92545	1883 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	FAM237B	A0A1B0GVD1	139 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026		A0A1W2PR77	199 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	PRR5-ARHGAP8	B1AHC4	643 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	STX7	O15400	261 aa	Known RBP	21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	TTC4	O95801	387 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	POLB	P06746	335 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	FAM153B	P0C7A2	387 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	PGAM1	P18669	254 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	CLDN2	P57739	230 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	SPEM2	Q0P670	501 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	STAT4	Q14765	748 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	LRRC14	Q15048	493 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	DUOXA1	Q1HG43	343 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	SKIDA1	Q1XH10	827 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	WSCD2	Q2TBF2	565 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	FAM153C	Q494X1	144 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026		Q6ZVL8	140 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	TMC3	Q7Z5M5	1100 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	TECPR1	Q7Z6L1	1165 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	RELL1	Q8IUW5	271 aa		21.88	■■□□□ 1.09
LTBP4-227	ENST00000600026	PALM2	Q8IXS6	379 aa		21.88	■■□□□ 1.09

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms