RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 WDR70Q9NW82 654 aa18.7■□□□□ 0.58
PNKP-213ENST00000599543 ZNF462Q96JM2 2506 aa18.7■□□□□ 0.58
PNKP-213ENST00000599543 GOLGA6L6A8MZA4 724 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 C1QL1O75973 258 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 CEACAM5P06731 702 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 CD48P09326 243 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 JMJD7P0C870 316 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 CCNB1P14635 433 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 CTPS1P17812 591 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 IL4RP24394 825 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 GARSP41250 739 aaKnown RBP18.69■□□□□ 0.58
PNKP-213ENST00000599543 GNPDA1P46926 289 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 DPYSL3Q14195 570 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 TIGD7Q6NT04 549 aaPredicted RBP18.69■□□□□ 0.58
PNKP-213ENST00000599543 Q6ZVL8 140 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 TSPAN33Q86UF1 283 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 TEX26Q8N6G2 289 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 FAM71BQ8TC56 605 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 GPBAR1Q8TDU6 330 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 FRMD8Q9BZ67 464 aaPredicted RBP18.69■□□□□ 0.58
PNKP-213ENST00000599543 INTUQ9ULD6 942 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 ATXN7L1Q9ULK2 861 aaPredicted RBP18.69■□□□□ 0.58
PNKP-213ENST00000599543 SUFUQ9UMX1 484 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 TTLL3Q9Y4R7 772 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 PCDHGA7Q9Y5G6 932 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 DUSP10Q9Y6W6 482 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 PIEZO2Q9H5I5 2752 aa18.69■□□□□ 0.58
PNKP-213ENST00000599543 HGFP14210 728 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 TEAD1P28347 426 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 SLC5A2P31639 672 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 EPHB1P54762 984 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 GALNT2Q10471 571 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 CLN3Q13286 438 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 PTPRRQ15256 657 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 MAP9Q49MG5 647 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 LRRC66Q68CR7 880 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 NCBP2-AS2Q69YL0 99 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 PCSK4Q6UW60 755 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 CCDC81Q6ZN84 652 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 RHOT2Q8IXI1 618 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 CBARPQ8N350 705 aaPredicted RBP18.68■□□□□ 0.58
PNKP-213ENST00000599543 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.68■□□□□ 0.58
PNKP-213ENST00000599543 KCTD6Q8NC69 237 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 ZDHHC1Q8WTX9 485 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 SNRNP27Q8WVK2 155 aaKnown RBP18.68■□□□□ 0.58
PNKP-213ENST00000599543 PIH1D2Q8WWB5 315 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 ZNF670Q9BS34 389 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 SPATS2LQ9NUQ6 558 aaKnown RBP18.68■□□□□ 0.58
PNKP-213ENST00000599543 TRNAU1APQ9NX07 287 aaKnown RBP18.68■□□□□ 0.58
PNKP-213ENST00000599543 TAAR2Q9P1P5 351 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 TRIM10Q9UDY6 481 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 PISDQ9UG56 409 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 SSUH2Q9Y2M2 353 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 PPIL1Q9Y3C6 166 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 LOXL2Q9Y4K0 774 aa18.68■□□□□ 0.58
PNKP-213ENST00000599543 ZW10O43264 779 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 PDHA1P08559 390 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 CA4P22748 312 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 GPR1P46091 355 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 MAZP56270 477 aaKnown RBP18.67■□□□□ 0.58
PNKP-213ENST00000599543 DPTQ07507 201 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 BIRC2Q13490 618 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 PEX6Q13608 980 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 PAFAH1B3Q15102 231 aaKnown RBP18.67■□□□□ 0.58
PNKP-213ENST00000599543 ANKRD20A8PQ5CZ79 823 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 ZFYVE27Q5T4F4 411 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 DOK6Q6PKX4 331 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 SLC30A9Q6PML9 568 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 NRROSQ86YC3 692 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 MAP7D3Q8IWC1 876 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 TMEM159Q96B96 161 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 AP2M1Q96CW1 435 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 CMKLR1Q99788 373 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 LACRTQ9GZZ8 138 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 CDH19Q9H159 772 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 CD84Q9UIB8 345 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 SLC17A4Q9Y2C5 497 aa18.67■□□□□ 0.58
PNKP-213ENST00000599543 A0A0U1RQS6 177 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 RHPN2P1A8MT19 583 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 K7ENP7 123 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 AGRPO00253 132 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 MATN3O15232 486 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 FZD6O60353 706 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 MTA2O94776 668 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 IPO7O95373 1038 aaKnown RBP18.66■□□□□ 0.58
PNKP-213ENST00000599543 MAP3K6O95382 1288 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 FUCA1P04066 466 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 ZNF30P17039 623 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 CES1P23141 567 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 AK4P27144 223 aaPredicted RBP18.66■□□□□ 0.58
PNKP-213ENST00000599543 ARSEP51690 589 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 GSDMDP57764 484 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 CFHR1Q03591 330 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 ZFP36L1Q07352 338 aaKnown RBP18.66■□□□□ 0.58
PNKP-213ENST00000599543 PDK2Q15119 407 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 IFI16Q16666 785 aaKnown RBP18.66■□□□□ 0.58
PNKP-213ENST00000599543 PHF19Q5T6S3 580 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 ALG1LQ6GMV1 187 aa18.66■□□□□ 0.58
PNKP-213ENST00000599543 INO80CQ6PI98 192 aaPredicted RBP18.66■□□□□ 0.58
PNKP-213ENST00000599543 TECPR1Q7Z6L1 1165 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms