RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 MACROD2A1Z1Q3 448 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 MTSS1O43312 755 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 CAPNS1P04632 268 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 TEAD1P28347 426 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 COPS2P61201 443 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 BBS12Q6ZW61 710 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 ZNF765Q7L2R6 523 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 PROSER1Q86XN7 944 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 NRSN1Q8IZ57 195 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 TXLNBQ8N3L3 684 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 DCBLD1Q8N8Z6 715 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 KYQ8NBH2 561 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 NXPE2Q96DL1 559 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 TEKT5Q96M29 485 aa22.52■■□□□ 1.2
CCDC9-204ENST00000599398 RIOK2Q9BVS4 552 aaKnown RBP22.52■■□□□ 1.2
CCDC9-204ENST00000599398 KLHL8Q9P2G9 620 aaPredicted RBP22.52■■□□□ 1.2
CCDC9-204ENST00000599398 ARHGEF17Q96PE2 2063 aaPredicted RBP22.52■■□□□ 1.2
CCDC9-204ENST00000599398 CCDC66A2RUB6 948 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 GRID2IPA4D2P6 1211 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 SRRM3A6NNA2 597 aaPredicted RBP22.51■■□□□ 1.19
CCDC9-204ENST00000599398 PMPCBO75439 489 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 MT-CYBP00156 380 aaPredicted RBP22.51■■□□□ 1.19
CCDC9-204ENST00000599398 CEACAM5P06731 702 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 CTNNA2P26232 953 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 GNPDA1P46926 289 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 RWDD2BP57060 319 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 CDK18Q07002 472 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 KIF5AQ12840 1032 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 PERM1Q5SV97 790 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 CCDC70Q6NSX1 233 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 ADAMTSL4Q6UY14 1074 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 FAM46DQ8NEK8 389 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 QKIQ96PU8 341 aaKnown RBP eCLIP22.51■■□□□ 1.19
CCDC9-204ENST00000599398 TRIB3Q96RU7 358 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 AGAP2Q99490 1192 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 FRMD8Q9BZ67 464 aaPredicted RBP22.51■■□□□ 1.19
CCDC9-204ENST00000599398 UBP1Q9NZI7 540 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 PKD2L2Q9NZM6 624 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 AK5Q9Y6K8 562 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 ZZEF1O43149 2961 aa22.51■■□□□ 1.19
CCDC9-204ENST00000599398 HACD1B0YJ81 288 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 H7C0C1 242 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 APOC4-APOC2K7ER74 178 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 TAF4O00268 1085 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 SOD1P00441 154 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 APOC2P02655 101 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 SLC4A1P02730 911 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 PYGLP06737 847 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 PIRTP0C851 137 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 CETN2P41208 172 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 ATP5OP48047 213 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 POLD2P49005 469 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 WASHC5Q12768 1159 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 LYSMD3Q7Z3D4 306 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 TRIM74Q86UV6 250 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 CACTIN-AS1Q8N1I8 211 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 LRRC57Q8N9N7 239 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 CCL4L1Q8NHW4 92 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 HTR3CQ8WXA8 447 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 DEPDC7Q96QD5 511 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 OSBPL8Q9BZF1 889 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 SYNDIG1Q9H7V2 258 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 TRIM10Q9UDY6 481 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 SUFUQ9UMX1 484 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 TMEM98Q9Y2Y6 226 aa22.5■■□□□ 1.19
CCDC9-204ENST00000599398 B4DGG1 531 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 F5H423 210 aaPredicted RBP22.49■■□□□ 1.19
CCDC9-204ENST00000599398 INPP4BO15327 924 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 NFKB1P19838 968 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 CD68P34810 354 aaPredicted RBP22.49■■□□□ 1.19
CCDC9-204ENST00000599398 SPINT3P49223 89 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 ILF3Q12906 894 aaKnown RBP eCLIP22.49■■□□□ 1.19
CCDC9-204ENST00000599398 SLC14A2Q15849 920 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 CDCP2Q5VXM1 449 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 PID1Q7Z2X4 250 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 PEX26Q7Z412 305 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 NLRP8Q86W28 1048 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 RAVER1Q8IY67 606 aaKnown RBP22.49■■□□□ 1.19
CCDC9-204ENST00000599398 TADA1Q96BN2 335 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 HIC2Q96JB3 615 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 VAT1Q99536 393 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 CCDC3Q9BQI4 270 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 DPEP2Q9H4A9 486 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 FAM83DQ9H4H8 585 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 ZFYVE1Q9HBF4 777 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 AMFRQ9UKV5 643 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 SHOC2Q9UQ13 582 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 SLC17A4Q9Y2C5 497 aa22.49■■□□□ 1.19
CCDC9-204ENST00000599398 A0A0U1RQJ8 604 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 CSO75390 466 aaKnown RBP22.48■■□□□ 1.19
CCDC9-204ENST00000599398 NDST3O95803 873 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 FUCA1P04066 466 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 TNNT3P45378 269 aaPredicted RBP22.48■■□□□ 1.19
CCDC9-204ENST00000599398 NOMO1Q15155 1222 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 SYCE1Q8N0S2 351 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 ZNF567Q8N184 647 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 PTCD2Q8WV60 388 aaKnown RBP22.48■■□□□ 1.19
CCDC9-204ENST00000599398 ALG3Q92685 438 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 CCDC74AQ96AQ1 378 aa22.48■■□□□ 1.19
CCDC9-204ENST00000599398 FERMT1Q9BQL6 677 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms