RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 CTSEP14091 401 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 ZFXP17010 805 aaPredicted RBP12.1□□□□□ -0.47
LIG1-217ENST00000599165 KELP23276 732 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 CTNNA1P35221 906 aaKnown RBP12.1□□□□□ -0.47
LIG1-217ENST00000599165 SPA17Q15506 151 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 PPP2R5EQ16537 467 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 ISXQ2M1V0 245 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 TEX44Q53QW1 395 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 TFDP3Q5H9I0 405 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 HENMT1Q5T8I9 393 aaKnown RBP12.1□□□□□ -0.47
LIG1-217ENST00000599165 RAET1GQ6H3X3 334 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 AADACL2Q6P093 401 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 KDELC1Q6UW63 502 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 GKN2Q86XP6 184 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 SDR16C5Q8N3Y7 309 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 ATL2Q8NHH9 583 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 EXD1Q8NHP7 514 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 ALG3Q92685 438 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 CCDC74AQ96AQ1 378 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 HAUS1Q96CS2 278 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 AP2M1Q96CW1 435 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 NXPE2Q96DL1 559 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 PRR11Q96HE9 360 aaPredicted RBP12.1□□□□□ -0.47
LIG1-217ENST00000599165 TEKT5Q96M29 485 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 CCDC3Q9BQI4 270 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 GORASP1Q9BQQ3 440 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 RIOK2Q9BVS4 552 aaKnown RBP12.1□□□□□ -0.47
LIG1-217ENST00000599165 MAK16Q9BXY0 300 aaKnown RBP12.1□□□□□ -0.47
LIG1-217ENST00000599165 SLC25A51Q9H1U9 297 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 C10orf88Q9H8K7 445 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 GLOD4Q9HC38 313 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 PHPT1Q9NRX4 125 aaPredicted RBP12.1□□□□□ -0.47
LIG1-217ENST00000599165 SPATS2LQ9NUQ6 558 aaKnown RBP12.1□□□□□ -0.47
LIG1-217ENST00000599165 NCKIPSDQ9NZQ3 722 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 GULP1Q9UBP9 304 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 SUFUQ9UMX1 484 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 GPR34Q9UPC5 381 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 TMEM98Q9Y2Y6 226 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 SPO11Q9Y5K1 396 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 ENTPD2Q9Y5L3 495 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 OAS3Q9Y6K5 1087 aaKnown RBP12.1□□□□□ -0.47
LIG1-217ENST00000599165 CACNA1GO43497 2377 aa12.1□□□□□ -0.47
LIG1-217ENST00000599165 ZNF106Q9H2Y7 1883 aaKnown RBP12.09□□□□□ -0.47
LIG1-217ENST00000599165 BRINP1O60477 761 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 ZRANB2O95218 330 aaKnown RBP eCLIP12.09□□□□□ -0.47
LIG1-217ENST00000599165 IVLP07476 585 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 PIRTP0C851 137 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 AK4P27144 223 aaPredicted RBP12.09□□□□□ -0.47
LIG1-217ENST00000599165 GPR1P46091 355 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 NR2C2P49116 596 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 SPINT3P49223 89 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 VAV2P52735 878 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 EPHB1P54762 984 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 TFDP2Q14188 446 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 HLTFQ14527 1009 aaKnown RBP eCLIP12.09□□□□□ -0.47
LIG1-217ENST00000599165 NOMO1Q15155 1222 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 SLC14A2Q15849 920 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 BBS12Q6ZW61 710 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 LYSMD3Q7Z3D4 306 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 KDELC2Q7Z4H8 507 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 DAAM2Q86T65 1068 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 NT5DC3Q86UY8 548 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 RCOR2Q8IZ40 523 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 NRSN1Q8IZ57 195 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 OXNAD1Q96HP4 312 aaPredicted RBP12.09□□□□□ -0.47
LIG1-217ENST00000599165 QKIQ96PU8 341 aaKnown RBP eCLIP12.09□□□□□ -0.47
LIG1-217ENST00000599165 MLPHQ9BV36 600 aaPredicted RBP12.09□□□□□ -0.47
LIG1-217ENST00000599165 HEMGNQ9BXL5 484 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 CARS2Q9HA77 564 aaKnown RBP12.09□□□□□ -0.47
LIG1-217ENST00000599165 KCTD5Q9NXV2 234 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 SEPT10Q9P0V9 454 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 PCDHA3Q9Y5H8 950 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 AHCTF1Q8WYP5 2266 aa12.09□□□□□ -0.47
LIG1-217ENST00000599165 A0A087WV48 116 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 C1orf232A0A0U1RR37 186 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 GOLGA6CA6NDK9 693 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 GOLGA6BA6NDN3 693 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 PDE2AO00408 941 aaPredicted RBP12.08□□□□□ -0.48
LIG1-217ENST00000599165 AURKAO14965 403 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 INPP4BO15327 924 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 DNAJC6O75061 913 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 MPOP05164 745 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 FGF1P05230 155 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 GOLGA6DP0CG33 693 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 NFKB1P19838 968 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 NFKBIAP25963 317 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 CTNNA2P26232 953 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 CDC25BP30305 580 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 ADCY8P40145 1251 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 GNPDA1P46926 289 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 RPIAP49247 311 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 MAZP56270 477 aaKnown RBP12.08□□□□□ -0.48
LIG1-217ENST00000599165 PCSK7Q16549 785 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 CERCAMQ5T4B2 595 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 DOK6Q6PKX4 331 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 C19orf48Q6RUI8 117 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 TMPRSS9Q7Z410 1059 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 TMC3Q7Z5M5 1100 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 TAF8Q7Z7C8 310 aa12.08□□□□□ -0.48
LIG1-217ENST00000599165 B3GNT8Q7Z7M8 397 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms