RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 COILP38432 576 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 RXRGP48443 463 aa19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 HS1BP3Q53T59 392 aa19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 CCDC137Q6PK04 289 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 SYT10Q6XYQ8 523 aa19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 HEATR4Q86WZ0 1026 aa19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 PELI3Q8N2H9 469 aa19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 FUBP1Q96AE4 644 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 CNTNAP3BQ96NU0 1288 aa19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 RIOK2Q9BVS4 552 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 CNTNAP3Q9BZ76 1288 aa19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 FAM83DQ9H4H8 585 aa19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 FEZ2Q9UHY8 353 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 PCDHGB2Q9Y5G2 931 aa19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 ZNF106Q9H2Y7 1883 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-214ENST00000597396 PCNX2A6NKB5 2137 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 H3BM21 787 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 PDE2AO00408 941 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 AURKAO14965 403 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 KELP23276 732 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 TEAD1P28347 426 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 EPHA8P29322 1005 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 TRIM23P36406 574 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 PAFAH1B1P43034 410 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 KIAA1024LP59773 190 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 ZNF542PQ5EBM4 170 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 ALS2CLQ60I27 953 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 TTC27Q6P3X3 843 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 ENPP7Q6UWV6 458 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 LINC00523Q86TU6 105 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 NLRP8Q86W28 1048 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 TTC30BQ8N4P2 665 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 GRK7Q8WTQ7 553 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 EID2BQ96D98 161 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 WDR92Q96MX6 357 aa19.59■□□□□ 0.73
SHKBP1-214ENST00000597396 FANCGO15287 622 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 PCDHGA12O60330 932 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 SDC3O75056 442 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 KRT14P02533 472 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 HOXC4P09017 264 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 MYCLP1P12525 358 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 CD59P13987 128 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 HMGCLP35914 325 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 FNTAP49354 379 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 HNRNPKP61978 463 aaKnown RBP eCLIP19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 BASP1P80723 227 aaKnown RBP19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 BNIP3Q12983 259 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 EIF2B5Q13144 721 aaKnown RBP19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 SEMA5AQ13591 1074 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 SHBQ15464 509 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 TRIP13Q15645 432 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 INAVAQ3KP66 663 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 PPP1R21Q6ZMI0 780 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 GATAD2AQ86YP4 633 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 CREG2Q8IUH2 290 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 SETD7Q8WTS6 366 aaKnown RBP19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 CDH19Q9H159 772 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 ARNT2Q9HBZ2 717 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 BPIFA1Q9NP55 256 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 KLQ9UEF7 1012 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 PKP3Q9Y446 797 aa19.58■□□□□ 0.72
SHKBP1-214ENST00000597396 C2orf81A6NN90 581 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 STX7O15400 261 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 FLRT2O43155 660 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 CSF2P04141 144 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 APRTP07741 180 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 ADRB1P08588 477 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 NME1P15531 152 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 JUNDP17535 347 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 VPS41P49754 854 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 DCDC1P59894 354 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 CDK3Q00526 305 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 PPARDQ03181 441 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 TAF1AQ15573 450 aaPredicted RBP19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 HENMT1Q5T8I9 393 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 DENND5AQ6IQ26 1287 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 ADAMTSL4Q6UY14 1074 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 HID1Q8IV36 788 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 NAXDQ8IW45 347 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 PHACTR4Q8IZ21 702 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 GPR26Q8NDV2 337 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 C16orf45Q96MC5 204 aaPredicted RBP19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 AGAP2Q99490 1192 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 LGR4Q9BXB1 951 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 SPATA16Q9BXB7 569 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 TEX101Q9BY14 249 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 NFKBIL1Q9UBC1 381 aaPredicted RBP19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 RNF14Q9UBS8 474 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 MOSPD1Q9UJG1 213 aa19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 ARID1BQ8NFD5 2236 aaPredicted RBP19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 TPRP12270 2363 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 ZFC3H1O60293 1989 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-214ENST00000597396 INPP4BO15327 924 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 BUD23O43709 281 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 SH3BP5O60239 455 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 PIAS2O75928 621 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 RASGRP1O95267 797 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 CRTAMO95727 393 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 GAS8O95995 478 aa19.56■□□□□ 0.72
SHKBP1-214ENST00000597396 SOD1P00441 154 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms