RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	PDP2	Q9P2J9	529 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	LHX3	Q9UBR4	397 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	KCND3	Q9UK17	655 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CROT	Q9UKG9	612 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	POLH	Q9Y253	713 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ATP8A1	Q9Y2Q0	1164 aa		13.73	□□□□□ -0.21
SHKBP1-208	ENST00000595726	SYCE3	A1L190	88 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	SMTNL1	A8MU46	457 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	LDLR	P01130	860 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	PRF1	P14222	555 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	MAPKAPK2	P49137	400 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ZNF165	P49910	485 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	PMS2	P54278	862 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ATP11A	P98196	1134 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	FMO1	Q01740	532 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CDR2	Q01850	454 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	INPP5J	Q15735	1006 aa	Predicted RBP	13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TSR1	Q2NL82	804 aa	Known RBP	13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	MANEAL	Q5VSG8	457 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	LIPI	Q6XZB0	460 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	BNIPL	Q7Z465	357 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	XYLT1	Q86Y38	959 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	AHCYL2	Q96HN2	611 aa	Known RBP	13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TRIT1	Q9H3H1	467 aa	Known RBP	13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	KLHL3	Q9UH77	587 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	SUFU	Q9UMX1	484 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	NEU3	Q9UQ49	428 aa		13.72	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TSPAN11	A1L157	253 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	GOLGA8S	H3BPF8	625 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	POLR1C	O15160	346 aa	Predicted RBP	13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CYP1A1	P04798	512 aa	Predicted RBP	13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CHRNB2	P17787	502 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	GRN	P28799	593 aa	Known RBP	13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	SCNN1A	P37088	669 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ADCY8	P40145	1251 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	IQCB1	Q15051	598 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CFAP58	Q5T655	872 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	NAA35	Q5VZE5	725 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ESX1	Q8N693	406 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	CPA5	Q8WXQ8	436 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	NCSTN	Q92542	709 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	C18orf8	Q96DM3	657 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	DPYSL5	Q9BPU6	564 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	ZPBP	Q9BS86	351 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	MAP10	Q9P2G4	905 aa		13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.71	□□□□□ -0.21
SHKBP1-208	ENST00000595726	PIPSL	A2A3N6	862 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	SORBS2	O94875	1100 aa	Known RBP	13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	LRIG2	O94898	1065 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	ELFN1	P0C7U0	828 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	PTMS	P20962	102 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	ADRA1B	P35368	520 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	CHAF1B	Q13112	559 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	ACOX1	Q15067	660 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	INO80D	Q53TQ3	878 aa	Predicted RBP	13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	EMC1	Q8N766	993 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	GALNT6	Q8NCL4	622 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	MSANTD4	Q8NCY6	345 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	HCAR2	Q8TDS4	363 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	SLC38A3	Q99624	504 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	ULBP3	Q9BZM4	244 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	TWSG1	Q9GZX9	223 aa		13.7	□□□□□ -0.22
SHKBP1-208	ENST00000595726	DCHS2	Q6V1P9	2916 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	PDE2A	O00408	941 aa	Predicted RBP	13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	EML2	O95834	649 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	MYCLP1	P12525	358 aa	Predicted RBP	13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	MMP8	P22894	467 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	MAN1A1	P33908	653 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	ACTR1B	P42025	376 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	RGR	P47804	291 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	ACTR1A	P61163	376 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	GPLD1	P80108	840 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	CDO1	Q16878	200 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	BRAT1	Q6PJG6	821 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	TRIM72	Q6ZMU5	477 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	OR10G6	Q8NH81	332 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	ZNF641	Q96N77	438 aa	Predicted RBP	13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	MFRP	Q9BY79	579 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	TMEM59L	Q9UK28	342 aa		13.69	□□□□□ -0.22
SHKBP1-208	ENST00000595726	MTOR	P42345	2549 aa		13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726		A0A1B0GTH6	734 aa		13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	CFAP69	A5D8W1	941 aa		13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	KRT86	O43790	486 aa		13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	MAP3K6	O95382	1288 aa		13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	PLEK	P08567	350 aa	Predicted RBP	13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	UNG	P13051	313 aa	Predicted RBP	13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	MAPK9	P45984	424 aa		13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	NOP2	P46087	812 aa	Known RBP	13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	PGD	P52209	483 aa		13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	NRG1	Q02297	640 aa	Predicted RBP	13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	FOXM1	Q08050	763 aa		13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	NFATC2	Q13469	925 aa		13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	SEMA5A	Q13591	1074 aa		13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.68	□□□□□ -0.22
SHKBP1-208	ENST00000595726	AFMID	Q63HM1	303 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms