RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 PHACTR4Q8IZ21 702 aa15.32■□□□□ 0.04
USE1-206ENST00000595101 ZNF548Q8NEK5 533 aaPredicted RBP15.32■□□□□ 0.04
USE1-206ENST00000595101 FERMT1Q9BQL6 677 aa15.32■□□□□ 0.04
USE1-206ENST00000595101 FSD1LQ9BXM9 530 aa15.32■□□□□ 0.04
USE1-206ENST00000595101 TEX101Q9BY14 249 aa15.32■□□□□ 0.04
USE1-206ENST00000595101 CLPBQ9H078 707 aa15.32■□□□□ 0.04
USE1-206ENST00000595101 PIH1D1Q9NWS0 290 aaKnown RBP15.32■□□□□ 0.04
USE1-206ENST00000595101 TOR4AQ9NXH8 423 aa15.32■□□□□ 0.04
USE1-206ENST00000595101 ZNF148Q9UQR1 794 aa15.32■□□□□ 0.04
USE1-206ENST00000595101 FADS2P1A8MWK0 482 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 FANCGO15287 622 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 INPP4BO15327 924 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 EPOP01588 193 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 GPR1P46091 355 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 GEMP55040 296 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 SRP54P61011 504 aaKnown RBP15.31■□□□□ 0.04
USE1-206ENST00000595101 HNRNPKP61978 463 aaKnown RBP eCLIP15.31■□□□□ 0.04
USE1-206ENST00000595101 CDK3Q00526 305 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 PPARDQ03181 441 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 DPTQ07507 201 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 DNAJC3Q13217 504 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 PRRT3Q5FWE3 981 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 ALS2CLQ60I27 953 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 DENND5AQ6IQ26 1287 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 ARHGEF18Q6ZSZ5 1173 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 SLCO6A1Q86UG4 719 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 TTC30BQ8N4P2 665 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 PRELID2Q8N945 189 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 BLOC1S5Q8TDH9 187 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 LMX1AQ8TE12 382 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 RTP4Q96DX8 246 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 LRRC61Q9BV99 259 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 GPR63Q9BZJ6 419 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 SUDS3Q9H7L9 328 aaPredicted RBP15.31■□□□□ 0.04
USE1-206ENST00000595101 APOBEC3BQ9UH17 382 aaKnown RBP15.31■□□□□ 0.04
USE1-206ENST00000595101 TMEM98Q9Y2Y6 226 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 KIF5CO60282 957 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 ANXA9O76027 345 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 TSHRP16473 764 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 BPIP17213 487 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 HK3P52790 923 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 MSLNQ13421 630 aaPredicted RBP15.31■□□□□ 0.04
USE1-206ENST00000595101 CCNG2Q16589 344 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 PARP6Q2NL67 630 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 HENMT1Q5T8I9 393 aaKnown RBP15.31■□□□□ 0.04
USE1-206ENST00000595101 KCTD11Q693B1 232 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 CCDC70Q6NSX1 233 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 RASGEF1CQ8N431 466 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 PDCD7Q8N8D1 485 aaKnown RBP15.31■□□□□ 0.04
USE1-206ENST00000595101 OR56A4Q8NGH8 313 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 CCL4L1Q8NHW4 92 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 CCHCR1Q8TD31 782 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 WDR92Q96MX6 357 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 OSBPL9Q96SU4 736 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 AP1M1Q9BXS5 423 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 FAM83DQ9H4H8 585 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 ARFGAP3Q9NP61 516 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 KLQ9UEF7 1012 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 CNOT6Q9ULM6 557 aaKnown RBP15.31■□□□□ 0.04
USE1-206ENST00000595101 KCTD3Q9Y597 815 aa15.31■□□□□ 0.04
USE1-206ENST00000595101 PCYT1BQ9Y5K3 369 aaPredicted RBP15.31■□□□□ 0.04
USE1-206ENST00000595101 TDRD6O60522 2096 aaKnown RBP15.3■□□□□ 0.04
USE1-206ENST00000595101 CACNB4O00305 520 aaPredicted RBP15.3■□□□□ 0.04
USE1-206ENST00000595101 TOR1BO14657 336 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 YKT6O15498 198 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 GPR39O43194 453 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 SIGLEC6O43699 453 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 CEACAM5P06731 702 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 MYCLP1P12525 358 aaPredicted RBP15.3■□□□□ 0.04
USE1-206ENST00000595101 HTR1BP28222 390 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 STIP1P31948 543 aaKnown RBP15.3■□□□□ 0.04
USE1-206ENST00000595101 CA5AP35218 305 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 KIAA1024LP59773 190 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 DEFB133Q30KQ1 61 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 ZNF648Q5T619 568 aaPredicted RBP15.3■□□□□ 0.04
USE1-206ENST00000595101 DOK6Q6PKX4 331 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 KLHDC8BQ8IXV7 354 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 PKD2L2Q9NZM6 624 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 MOSPD1Q9UJG1 213 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 AAR2Q9Y312 384 aaKnown RBP15.3■□□□□ 0.04
USE1-206ENST00000595101 ARL5AQ9Y689 179 aa15.3■□□□□ 0.04
USE1-206ENST00000595101 OAS3Q9Y6K5 1087 aaKnown RBP15.3■□□□□ 0.04
USE1-206ENST00000595101 ARID1BQ8NFD5 2236 aaPredicted RBP15.3■□□□□ 0.04
USE1-206ENST00000595101 AQP9O43315 295 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 TPH1P17752 444 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 HLA-DPA1P20036 260 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 PRPSAP1Q14558 356 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 P3H1Q32P28 736 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 SFTPA2Q8IWL1 248 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 NRSN1Q8IZ57 195 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 TBL1YQ9BQ87 522 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 FRMD8P1Q9BZ68 369 aaPredicted RBP15.29■□□□□ 0.04
USE1-206ENST00000595101 SLC13A1Q9BZW2 595 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 TMEM168Q9H0V1 697 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 ETNK1Q9HBU6 452 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 CYP4F12Q9HCS2 524 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 ST14Q9Y5Y6 855 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 FGF1P05230 155 aa15.29■□□□□ 0.04
USE1-206ENST00000595101 HOXC4P09017 264 aaPredicted RBP15.29■□□□□ 0.04
USE1-206ENST00000595101 FTH1P19P0C7X4 201 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms