RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 PNPLA1Q8N8W4 532 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 CYGBQ8WWM9 190 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 BORCS5Q969J3 196 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 TMEM125Q96AQ2 219 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 THAP11Q96EK4 314 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 IMP4Q96G21 291 aaKnown RBP14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 FBXL20Q96IG2 436 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 TRIM62Q9BVG3 475 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 SEZ6LQ9BYH1 1024 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 TRIM54Q9BYV2 358 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 SLC38A7Q9NVC3 462 aa14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 SMPD3Q9NY59 655 aaPredicted RBP14.83□□□□□ -0.03
SMARCA4-219ENST00000592604 TPST1O60507 370 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 CBFA2T3O75081 653 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 UMPSP11172 480 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 LBPP18428 481 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 SLC5A3P53794 718 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 GRSF1Q12849 480 aaKnown RBP eCLIP14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 ILF2Q12905 390 aaKnown RBP14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 CAPRIN1Q14444 709 aaKnown RBP14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 IQSEC1Q6DN90 963 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 DCP1BQ8IZD4 617 aaKnown RBP14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 TBC1D15Q8TC07 691 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 GTF3C2Q8WUA4 911 aaPredicted RBP14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 VPS50Q96JG6 964 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 FCRL2Q96LA5 508 aaPredicted RBP14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 TUBA1CQ9BQE3 449 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 MID1IP1Q9NPA3 183 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 TBC1D23Q9NUY8 699 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 GIMAP2Q9UG22 337 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 ZNF639Q9UID6 485 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 SH3GLB1Q9Y371 365 aa14.83□□□□□ -0.04
SMARCA4-219ENST00000592604 PPP6CO00743 305 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 EI24O14681 340 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 PEX11BO96011 259 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 ANKDD1AQ495B1 522 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 DDIASQ8IXT1 998 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 PTGR2Q8N8N7 351 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 RTL3Q8N8U3 475 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 SH3RF2Q8TEC5 729 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 GIPC3Q8TF64 312 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 MYLPFQ96A32 169 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 TUBB1Q9H4B7 451 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 POLR1BQ9H9Y6 1135 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 TMEM9Q9P0T7 183 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 PTGDR2Q9Y5Y4 395 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 KANSL1LA0AUZ9 987 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 CLIC3O95833 236 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 FDXRP22570 491 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 PCSK1P29120 753 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 CD97P48960 835 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 MRPL19P49406 292 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 CRYBB1P53674 252 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 FOXA1P55317 472 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 CYP51A1Q16850 503 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 PUS10Q3MIT2 529 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 GPR107Q5VW38 600 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 TBC1D21Q8IYX1 336 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 PNPT1Q8TCS8 783 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 DSEQ9UL01 958 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 TMX2-CTNND1H3BSU7 103 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 ZBTB7AO95365 584 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 MTHFD2P13995 350 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 IDO1P14902 403 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 CHRM3P20309 590 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 RPS9P46781 194 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 GSK3BP49841 420 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 ARSDP51689 593 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 ADARB1P78563 741 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 FSCN1Q16658 493 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 AARS2Q5JTZ9 985 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 TWF2Q6IBS0 349 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 KCTD8Q6ZWB6 473 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 RAB44Q7Z6P3 723 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 LDB1Q86U70 411 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 PIM3Q86V86 326 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 RHEBL1Q8TAI7 183 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 PAIP1Q9H074 479 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 ABHD16BQ9H3Z7 469 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 INTS10Q9NVR2 710 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 FNIP2Q9P278 1114 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 TDRKHQ9Y2W6 561 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 GPR45Q9Y5Y3 372 aa14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 OAS3Q9Y6K5 1087 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-219ENST00000592604 A0A1W2PP18 115 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 A0A1W2PPW3 197 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 WASH4PA8MWX3 477 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 VPS4BO75351 444 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 E2F6O75461 281 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 HGFP14210 728 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 CCR1P32246 355 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 ETFBP38117 255 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 HLCSP50747 726 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 CLCNKBP51801 687 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 TIAL1Q01085 375 aaKnown RBP eCLIP14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 GRIK2Q13002 908 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 OGFOD2Q6N063 350 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 FAM171BQ6P995 826 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 C3orf58Q8NDZ4 430 aa14.81□□□□□ -0.04
SMARCA4-219ENST00000592604 OR52K2Q8NGK3 314 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms