RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ENTPD2Q9Y5L3 495 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 UNC13CQ8NB66 2214 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 FAM208BQ5VWN6 2430 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 A0A0A6YYK5 440 aaPredicted RBP13.82□□□□□ -0.2
APOC1-208ENST00000592535 C1orf232A0A0U1RR37 186 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 A0A1W2PNU3 283 aaPredicted RBP13.82□□□□□ -0.2
APOC1-208ENST00000592535 B4DGG1 531 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 ANKRD66B4E2M5 251 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 NTN3O00634 580 aaPredicted RBP13.82□□□□□ -0.2
APOC1-208ENST00000592535 TCEA3O75764 348 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 FECHP22830 423 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 AK4P27144 223 aaPredicted RBP13.82□□□□□ -0.2
APOC1-208ENST00000592535 EIF2S3P41091 472 aaKnown RBP13.82□□□□□ -0.2
APOC1-208ENST00000592535 PDX1P52945 283 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 ADCY2Q08462 1091 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 SPIDRQ14159 915 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 TFDP2Q14188 446 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 PRKD1Q15139 912 aaPredicted RBP13.82□□□□□ -0.2
APOC1-208ENST00000592535 TBC1D25Q3MII6 688 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 C3orf38Q5JPI3 329 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 C11orf63Q6NUN7 778 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 ADAMTSL4Q6UY14 1074 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 TRIM74Q86UV6 250 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 NT5DC3Q86UY8 548 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 NLRP8Q86W28 1048 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 NRSN1Q8IZ57 195 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 SNIP1Q8TAD8 396 aaKnown RBP13.82□□□□□ -0.2
APOC1-208ENST00000592535 WDR48Q8TAF3 677 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 GPBAR1Q8TDU6 330 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 IMP4Q96G21 291 aaKnown RBP13.82□□□□□ -0.2
APOC1-208ENST00000592535 TRIB3Q96RU7 358 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 WDR24Q96S15 920 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 MLPHQ9BV36 600 aaPredicted RBP13.82□□□□□ -0.2
APOC1-208ENST00000592535 BRD8Q9H0E9 1235 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 SLC25A51Q9H1U9 297 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 DPEP2Q9H4A9 486 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 LUC7LQ9NQ29 371 aaKnown RBP13.82□□□□□ -0.2
APOC1-208ENST00000592535 SPATS2LQ9NUQ6 558 aaKnown RBP13.82□□□□□ -0.2
APOC1-208ENST00000592535 TMEM98Q9Y2Y6 226 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 SCN8AQ9UQD0 1980 aa13.82□□□□□ -0.2
APOC1-208ENST00000592535 CHD6Q8TD26 2715 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 hCG_1818297A0A087WSY0 165 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 A0A1W2PQM1 296 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 RCCD1A6NED2 376 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 INPP4BO15327 924 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 NDUFA10O95299 355 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 RPLP0P05388 317 aaKnown RBP13.81□□□□□ -0.2
APOC1-208ENST00000592535 IVLP07476 585 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 PTPN3P26045 913 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 ITPKBP27987 946 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 ACTN2P35609 894 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 LSSP48449 732 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 NR2C2P49116 596 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 CCL7P80098 99 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 ILF3Q12906 894 aaKnown RBP eCLIP13.81□□□□□ -0.2
APOC1-208ENST00000592535 HLTFQ14527 1009 aaKnown RBP eCLIP13.81□□□□□ -0.2
APOC1-208ENST00000592535 PCSK7Q16549 785 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 C14orf28Q4W4Y0 310 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 TEX44Q53QW1 395 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 TFDP3Q5H9I0 405 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 CERCAMQ5T4B2 595 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 KDELC2Q7Z4H8 507 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 TMTC1Q8IUR5 882 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 CCDC50Q8IVM0 306 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 KATNAL2Q8IYT4 538 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 OR6C4Q8NGE1 309 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 KRT35Q92764 455 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 FGF11Q92914 225 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 TADA1Q96BN2 335 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 HAUS1Q96CS2 278 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 CRELD1Q96HD1 420 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 HIC2Q96JB3 615 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 ADGRE3Q9BY15 652 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 GSDMCQ9BYG8 508 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 POLR1BQ9H9Y6 1135 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 GLOD4Q9HC38 313 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 TRNAU1APQ9NX07 287 aaKnown RBP13.81□□□□□ -0.2
APOC1-208ENST00000592535 SATB2Q9UPW6 733 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 REXO2Q9Y3B8 237 aaKnown RBP13.81□□□□□ -0.2
APOC1-208ENST00000592535 PLEKHM1Q9Y4G2 1056 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 ST14Q9Y5Y6 855 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 EPN1Q9Y6I3 576 aaPredicted RBP13.81□□□□□ -0.2
APOC1-208ENST00000592535 RNF215Q9Y6U7 377 aa13.81□□□□□ -0.2
APOC1-208ENST00000592535 PMS2P1A4D2B8 440 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 DXOO77932 396 aaKnown RBP13.8□□□□□ -0.2
APOC1-208ENST00000592535 ZRANB2O95218 330 aaKnown RBP eCLIP13.8□□□□□ -0.2
APOC1-208ENST00000592535 MT-CYBP00156 380 aaPredicted RBP13.8□□□□□ -0.2
APOC1-208ENST00000592535 PYGLP06737 847 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 PIRTP0C851 137 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 GLB1P16278 677 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 ADCY8P40145 1251 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 SPINT3P49223 89 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 MAZP56270 477 aaKnown RBP13.8□□□□□ -0.2
APOC1-208ENST00000592535 CTBSQ01459 385 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 HENMT1Q5T8I9 393 aaKnown RBP13.8□□□□□ -0.2
APOC1-208ENST00000592535 SLC30A9Q6PML9 568 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 RAD9BQ6WBX8 426 aa13.8□□□□□ -0.2
APOC1-208ENST00000592535 MARK2Q7KZI7 788 aaKnown RBP13.8□□□□□ -0.2
APOC1-208ENST00000592535 BZW1Q7L1Q6 419 aaKnown RBP13.8□□□□□ -0.2
APOC1-208ENST00000592535 LYSMD3Q7Z3D4 306 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms