RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 TSACCQ96A04 125 aaPredicted RBP7.41□□□□□ -1.22
VAT1-209ENST00000592388 RNF31Q96EP0 1072 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 TBATAQ96M53 351 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 NSMCE3Q96MG7 304 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 ERGIC2Q96RQ1 377 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 CTRCQ99895 268 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 AGPAT1Q99943 283 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 NCAPGQ9BPX3 1015 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 NUDT22Q9BRQ3 303 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 SYT11Q9BT88 431 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 SNRNP25Q9BV90 132 aaKnown RBP7.41□□□□□ -1.22
VAT1-209ENST00000592388 EDEM3Q9BZQ6 932 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 LRRC19Q9H756 370 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 PCDH12Q9NPG4 1184 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 RCOR3Q9P2K3 495 aaPredicted RBP7.41□□□□□ -1.22
VAT1-209ENST00000592388 UBA2Q9UBT2 640 aaPredicted RBP7.41□□□□□ -1.22
VAT1-209ENST00000592388 AP4E1Q9UPM8 1137 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 MFHAS1Q9Y4C4 1052 aa7.41□□□□□ -1.22
VAT1-209ENST00000592388 POLEQ07864 2286 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 ZNF469Q96JG9 3925 aaPredicted RBP7.4□□□□□ -1.22
VAT1-209ENST00000592388 PRRC2CQ9Y520 2896 aaKnown RBP7.4□□□□□ -1.22
VAT1-209ENST00000592388 A6NCN8 305 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 ZSCAN5CA6NGD5 496 aaPredicted RBP7.4□□□□□ -1.22
VAT1-209ENST00000592388 WASH4PA8MWX3 477 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 LRRTM2O43300 516 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 BUB1BO60566 1050 aaPredicted RBP7.4□□□□□ -1.22
VAT1-209ENST00000592388 ZG16O60844 167 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 PNLIPP16233 465 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 PSMA2P25787 234 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 ALDH4A1P30038 563 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 CSTF2P33240 577 aaKnown RBP eCLIP7.4□□□□□ -1.22
VAT1-209ENST00000592388 EIF4A3P38919 411 aaKnown RBP7.4□□□□□ -1.22
VAT1-209ENST00000592388 MMP12P39900 470 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 B4GALNT1Q00973 533 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 RALGDSQ12967 914 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 ALG11Q2TAA5 492 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 SMTNL2Q2TAL5 461 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 PARP15Q460N3 678 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 JMJD6Q6NYC1 403 aaPredicted RBP7.4□□□□□ -1.22
VAT1-209ENST00000592388 DCUN1D2Q6PH85 259 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 SASS6Q6UVJ0 657 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 CYP4V2Q6ZWL3 525 aaPredicted RBP7.4□□□□□ -1.22
VAT1-209ENST00000592388 GKN2Q86XP6 184 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 CAMK1DQ8IU85 385 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 ARHGAP12Q8IWW6 846 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 MCOLN2Q8IZK6 566 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 ARFGAP1Q8N6T3 406 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 TSEN2Q8NCE0 465 aaKnown RBP7.4□□□□□ -1.22
VAT1-209ENST00000592388 AGBL5Q8NDL9 886 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 ASB12Q8WXK4 309 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 FUBP1Q96AE4 644 aaKnown RBP7.4□□□□□ -1.22
VAT1-209ENST00000592388 ARHGEF26Q96DR7 871 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 RTP4Q96DX8 246 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 PDXPQ96GD0 296 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 RANBP9Q96S59 729 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 KCTD15Q96SI1 283 aaPredicted RBP7.4□□□□□ -1.22
VAT1-209ENST00000592388 MDFIQ99750 246 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 CNPY3Q9BT09 278 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 SLC25A23Q9BV35 468 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 SPRY4Q9C004 299 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 SLC39A8Q9C0K1 460 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 DHX35Q9H5Z1 703 aaKnown RBP7.4□□□□□ -1.22
VAT1-209ENST00000592388 CATSPERBQ9H7T0 1116 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 MRPL40Q9NQ50 206 aaKnown RBP7.4□□□□□ -1.22
VAT1-209ENST00000592388 ASF1BQ9NVP2 202 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 ANO10Q9NW15 660 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 TMEM51Q9NW97 253 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 PCSK1NQ9UHG2 260 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 OR1A2Q9Y585 309 aa7.4□□□□□ -1.22
VAT1-209ENST00000592388 CXorf51AA0A1B0GTR3 108 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 TSPAN11A1L157 253 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 TTC24A2A3L6 582 aaPredicted RBP7.39□□□□□ -1.23
VAT1-209ENST00000592388 ANKRD62A6NC57 917 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 LRRC53A6NM62 1247 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 DFFAO00273 331 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 EEF2KO00418 725 aaKnown RBP7.39□□□□□ -1.23
VAT1-209ENST00000592388 FGF10O15520 208 aaPredicted RBP7.39□□□□□ -1.23
VAT1-209ENST00000592388 PRAMEF11O60813 436 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 KATNA1O75449 491 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 FAM155BO75949 473 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 TCF4P15884 667 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 GM2AP17900 193 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 CDK11BP21127 795 aaKnown RBP7.39□□□□□ -1.23
VAT1-209ENST00000592388 XPAP23025 273 aaPredicted RBP7.39□□□□□ -1.23
VAT1-209ENST00000592388 ITGA3P26006 1051 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 VARSP26640 1264 aaKnown RBP7.39□□□□□ -1.23
VAT1-209ENST00000592388 DLSTP36957 453 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 LIG3P49916 1009 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 PAPOLAP51003 745 aaKnown RBP7.39□□□□□ -1.23
VAT1-209ENST00000592388 BLKP51451 505 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 HK3P52790 923 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 YBEYP58557 167 aaPredicted RBP7.39□□□□□ -1.23
VAT1-209ENST00000592388 KRTAP10-9P60411 292 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 TYRO3Q06418 890 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 RAD51Q06609 339 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 CDK18Q07002 472 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 MAMLD1Q13495 774 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 LRRC14Q15048 493 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 UGP2Q16851 508 aa7.39□□□□□ -1.23
VAT1-209ENST00000592388 TMEM52BQ4KMG9 183 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms