RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 TAZQ16635 292 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 COL28A1Q2UY09 1125 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 DEFB133Q30KQ1 61 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 ZDHHC24Q6UX98 284 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 SPOCD1Q6ZMY3 1216 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 TMC3Q7Z5M5 1100 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 PAF1Q8N7H5 531 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 CCHCR1Q8TD31 782 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 HSPH1Q92598 858 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 ART4Q93070 314 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 ZNF599Q96NL3 588 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 DEPDC7Q96QD5 511 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 SEPT3Q9UH03 358 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 ATP8A1Q9Y2Q0 1164 aa17.47■□□□□ 0.39
CIRBP-235ENST00000591935 COL27A1Q8IZC6 1860 aaPredicted RBP17.46■□□□□ 0.39
CIRBP-235ENST00000591935 LMO7DNF2Z398 122 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 RRP8O43159 456 aaKnown RBP17.46■□□□□ 0.39
CIRBP-235ENST00000591935 LZTS3O60299 673 aaPredicted RBP17.46■□□□□ 0.39
CIRBP-235ENST00000591935 C6P13671 934 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 HSD17B3P37058 310 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 LIG3P49916 1009 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 EIF3BP55884 814 aaKnown RBP17.46■□□□□ 0.39
CIRBP-235ENST00000591935 SLMAPQ14BN4 828 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 PPP1R7Q15435 360 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 TUBB8Q3ZCM7 444 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 PRRT3Q5FWE3 981 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 TFDP3Q5H9I0 405 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 FAXCQ5TGI0 409 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 CDCP2Q5VXM1 449 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 LRRC69Q6ZNQ3 347 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 CROCCP2Q86T23 111 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 PDZD3Q86UT5 571 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 PHACTR4Q8IZ21 702 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 SDR16C5Q8N3Y7 309 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 TTC13Q8NBP0 860 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 IFI44Q8TCB0 444 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 MAPK15Q8TD08 544 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 C1orf54Q8WWF1 131 aa17.46■□□□□ 0.39
CIRBP-235ENST00000591935 hCG_1818297A0A087WSY0 165 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 A0A1W2PQ67 120 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 PEX11BO96011 259 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 ANXA6P08133 673 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 ACTN2P35609 894 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 MMP12P39900 470 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 RPL21P46778 160 aaKnown RBP17.45■□□□□ 0.38
CIRBP-235ENST00000591935 SCNN1BP51168 640 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 AP1S1P61966 158 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 SLC25A11Q02978 314 aaKnown RBP17.45■□□□□ 0.38
CIRBP-235ENST00000591935 DHX9Q08211 1270 aaKnown RBP17.45■□□□□ 0.38
CIRBP-235ENST00000591935 CALCOCO2Q13137 446 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 LBRQ14739 615 aaKnown RBP17.45■□□□□ 0.38
CIRBP-235ENST00000591935 ELOCQ15369 112 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 NR0B2Q15466 257 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 MFSD7Q6UXD7 560 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 CEP128Q6ZU80 1094 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 LSMEM2Q8N112 164 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 FSTL5Q8N475 847 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-235ENST00000591935 CCDC89Q8N998 374 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 SCG3Q8WXD2 468 aaKnown RBP17.45■□□□□ 0.38
CIRBP-235ENST00000591935 NAT6Q93015 286 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 RNF25Q96BH1 459 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-235ENST00000591935 GRAMD1AQ96CP6 724 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 ECHDC3Q96DC8 303 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 CSPG4P5Q96PW8 444 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 PSKH2Q96QS6 385 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 FOXP3Q9BZS1 431 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 TRIM31Q9BZY9 425 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 CLPBQ9H078 707 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 PCDH18Q9HCL0 1135 aa17.45■□□□□ 0.38
CIRBP-235ENST00000591935 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.45■□□□□ 0.38
CIRBP-235ENST00000591935 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-235ENST00000591935 EME2A4GXA9 379 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-235ENST00000591935 GOLGA6CA6NDK9 693 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 A8MX80 341 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 TRAFD1O14545 582 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-235ENST00000591935 CELA2BP08218 269 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-235ENST00000591935 GOLGA6DP0CG33 693 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 HOXB3P14651 431 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-235ENST00000591935 NFKBIAP25963 317 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 EIF2S3P41091 472 aaKnown RBP17.44■□□□□ 0.38
CIRBP-235ENST00000591935 CDKN2BP42772 138 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 ABCG1P45844 678 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 KCNJ1P48048 391 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 PLTPP55058 493 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 RALGDSQ12967 914 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 MTM1Q13496 603 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 INPP5AQ14642 412 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 UAP1Q16222 522 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-235ENST00000591935 CDKN3Q16667 212 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 C6orf132Q5T0Z8 1188 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 ESRP1Q6NXG1 681 aaKnown RBP17.44■□□□□ 0.38
CIRBP-235ENST00000591935 LVRNQ6Q4G3 990 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 BBS5Q8N3I7 341 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 PGBD5Q8N414 524 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 SNIP1Q8TAD8 396 aaKnown RBP17.44■□□□□ 0.38
CIRBP-235ENST00000591935 WDR48Q8TAF3 677 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 FAM76AQ8TAV0 307 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 NSMCE1Q8WV22 266 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 TEKT4Q8WW24 435 aa17.44■□□□□ 0.38
CIRBP-235ENST00000591935 FGF11Q92914 225 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms