RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 TCP11X1B4DZS4 312 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 GOLGA6L22H0YM25 854 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 POLR1CO15160 346 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 ZW10O43264 779 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 KATNA1O75449 491 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 SOD1P00441 154 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 GOLGA6DP0CG33 693 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 LHCGRP22888 699 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 TNFRSF8P28908 595 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 PPP1R2P41236 205 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 PTPN9P43378 593 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 MAPK9P45984 424 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 FASLGP48023 281 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 COPB1P53618 953 aaKnown RBP12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 PMS2P54278 862 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 UBE2HP62256 183 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 NFATC2Q13469 925 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 GRM3Q14832 879 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 PARP15Q460N3 678 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 CPZQ66K79 652 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 STRADAQ7RTN6 431 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 NTAN1Q96AB6 310 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 TIGD1Q96MW7 591 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 SMIM14Q96QK8 99 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 RUFY1Q96T51 708 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 DPYSL5Q9BPU6 564 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 C11orf70Q9BRQ4 267 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 SLC39A8Q9C0K1 460 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 IGSF5Q9NSI5 407 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 GOLGA6AQ9NYA3 693 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 POLHQ9Y253 713 aa12.71□□□□□ -0.37
PRKCSH-210ENST00000589990 SETD2Q9BYW2 2564 aaPredicted RBP12.71□□□□□ -0.38
PRKCSH-210ENST00000589990 GTPBP10A4D1E9 387 aaKnown RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 PDE2AO00408 941 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 SORBS2O94875 1100 aaKnown RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 HEXIM1O94992 359 aaKnown RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 LSM8O95777 96 aaKnown RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 IVLP07476 585 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 CHRNB2P17787 502 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 RFC1P35251 1148 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 PAPOLAP51003 745 aaKnown RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 GFERP55789 205 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 BPIFB4P59827 614 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 SH3BP2P78314 561 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 BCL2L1Q07817 233 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 CHAF1BQ13112 559 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 RAET1GQ6H3X3 334 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 WDR74Q6RFH5 385 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 Q6ZVL8 140 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 MAMDC2Q7Z304 686 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 SLFN11Q7Z7L1 901 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 TSPAN33Q86UF1 283 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 TICAM1Q8IUC6 712 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 TP53INP2Q8IXH6 220 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 CBARPQ8N350 705 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 SFRP1Q8N474 314 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 ESX1Q8N693 406 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 PAF1Q8N7H5 531 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 OR10G6Q8NH81 332 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 EPS8L1Q8TE68 723 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 DTD2Q96FN9 168 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 SCARF2Q96GP6 870 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 ELMO2Q96JJ3 720 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 OR2M4Q96R27 311 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 TBC1D10AQ9BXI6 508 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 ULBP3Q9BZM4 244 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 TRIT1Q9H3H1 467 aaKnown RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 CUEDC1Q9NWM3 386 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 GPATCH2LQ9NWQ4 482 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 CD84Q9UIB8 345 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 ERRFI1Q9UJM3 462 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 KCND3Q9UK17 655 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 PRKAB1Q9Y478 270 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 CELSR1Q9NYQ6 3014 aa12.7□□□□□ -0.38
PRKCSH-210ENST00000589990 CSMD2Q7Z408 3487 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 CCP110O43303 1012 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 PALMO75781 387 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 MMP8P22894 467 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 CSNK1DP48730 415 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 SCNN1BP51168 640 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 FOXM1Q08050 763 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 PTP4A2Q12974 167 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 PYCR3Q53H96 274 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 SCYL2Q6P3W7 929 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 WDR59Q6PJI9 974 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 C6orf15Q6UXA7 325 aaPredicted RBP12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 PDCD6IPQ8WUM4 868 aaKnown RBP12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 AGAP2Q99490 1192 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 ZPBPQ9BS86 351 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 NAA15Q9BXJ9 866 aaKnown RBP12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 TWSG1Q9GZX9 223 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 ZNF768Q9H5H4 540 aaKnown RBP12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 AKIRIN1Q9H9L7 192 aaPredicted RBP12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 NOCTQ9UK39 431 aaKnown RBP12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 FZD10Q9ULW2 581 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 PCDHB3Q9Y5E6 796 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 PCDHGC4Q9Y5F7 938 aa12.69□□□□□ -0.38
PRKCSH-210ENST00000589990 ITPR3Q14573 2671 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms