RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.14■□□□□ 0.01
ATG4D-211ENST00000589753 PCDHGA2Q9Y5H1 932 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 RPS6KL1Q9Y6S9 549 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 SCN8AQ9UQD0 1980 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 MEI4A8MW99 385 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 CCL22O00626 93 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 SLC31A1O15431 190 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 TTC4O95801 387 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 PAMP19021 973 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 NUDT1P36639 197 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 DCDC1P59894 354 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 SLMAPQ14BN4 828 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 LRRC14Q15048 493 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 LRRK1Q38SD2 2015 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 ANKRD20A4Q4UJ75 823 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 SPANXN3Q5MJ09 141 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 SPDYCQ5MJ68 293 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 ALS2CLQ60I27 953 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 RELL1Q8IUW5 271 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 PALM2Q8IXS6 379 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 TMEFF1Q8IYR6 380 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 TP53I13Q8NBR0 393 aaPredicted RBP15.13■□□□□ 0.01
ATG4D-211ENST00000589753 SNX19Q92543 992 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 AP2M1Q96CW1 435 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 CFAP36Q96G28 342 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 CDKN2AIPNLQ96HQ2 116 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 HSPA12BQ96MM6 686 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 FCRL3Q96P31 734 aaPredicted RBP15.13■□□□□ 0.01
ATG4D-211ENST00000589753 LENG8Q96PV6 779 aaPredicted RBP15.13■□□□□ 0.01
ATG4D-211ENST00000589753 RIOK2Q9BVS4 552 aaKnown RBP15.13■□□□□ 0.01
ATG4D-211ENST00000589753 IL26Q9NPH9 171 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 APPL1Q9UKG1 709 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 RAB21Q9UL25 225 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 DMTF1Q9Y222 760 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 ZDBF2Q9HCK1 2354 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 NUMA1Q14980 2115 aa15.13■□□□□ 0.01
ATG4D-211ENST00000589753 GLYATL1P3A0A0U1RQE8 302 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 ZCWPW2A0A1B0GU75 182 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 A0A1W2PPC4 97 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 H7C0S8 307 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 CTIFO43310 598 aaKnown RBP15.12■□□□□ 0.01
ATG4D-211ENST00000589753 LILRB5O75023 590 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 FAM153BP0C7A2 387 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 HNRNPA2B1P22626 353 aaKnown RBP15.12■□□□□ 0.01
ATG4D-211ENST00000589753 AKT2P31751 481 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 ARSDP51689 593 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 PRAMEP78395 509 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 DPTQ07507 201 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 CRYMQ14894 314 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 WSCD2Q2TBF2 565 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 FAM153CQ494X1 144 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 HENMT1Q5T8I9 393 aaKnown RBP15.12■□□□□ 0.01
ATG4D-211ENST00000589753 PMS2CLQ68D20 193 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 KIAA0930Q6ICG6 404 aaPredicted RBP15.12■□□□□ 0.01
ATG4D-211ENST00000589753 FAM151BQ6UXP7 276 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 UNC5AQ6ZN44 842 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 CEP68Q76N32 757 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 NLRP8Q86W28 1048 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 SLC41A1Q8IVJ1 513 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.12■□□□□ 0.01
ATG4D-211ENST00000589753 DENND6BQ8NEG7 585 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 SCAMP4Q969E2 229 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 HDAC10Q969S8 669 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 CENPTQ96BT3 561 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 C9orf72Q96LT7 481 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 TBATAQ96M53 351 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 PRRX2Q99811 253 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 SPATA16Q9BXB7 569 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 SUDS3Q9H7L9 328 aaPredicted RBP15.12■□□□□ 0.01
ATG4D-211ENST00000589753 EBF2Q9HAK2 575 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 FZD3Q9NPG1 666 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 FAM169AQ9Y6X4 670 aa15.12■□□□□ 0.01
ATG4D-211ENST00000589753 CCDC162PA2VCL2 907 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 RAD51BO15315 384 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 SRP72O76094 671 aaKnown RBP15.11■□□□□ 0.01
ATG4D-211ENST00000589753 VAPBO95292 243 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 PRAMEF1O95521 474 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 PCCBP05166 539 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 CD27P26842 260 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 MC4RP32245 332 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 XIAPP98170 497 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 PEX6Q13608 980 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 IRF4Q15306 451 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 PLK5Q496M5 336 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 WDR45BQ5MNZ6 344 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 STEAP4Q687X5 459 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 RAET1GQ6H3X3 334 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 AFTPHQ6ULP2 937 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 ARMCX6Q7L4S7 300 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 TRAM1L1Q8N609 369 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 OR6P1Q8NGX9 317 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 DTX3LQ8TDB6 740 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 KLF6Q99612 283 aaPredicted RBP15.11■□□□□ 0.01
ATG4D-211ENST00000589753 MYOCQ99972 504 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 ZSCAN5AQ9BUG6 496 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 MBNL1Q9NR56 388 aaKnown RBP15.11■□□□□ 0.01
ATG4D-211ENST00000589753 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.11■□□□□ 0.01
ATG4D-211ENST00000589753 SLC30A1Q9Y6M5 507 aa15.11■□□□□ 0.01
ATG4D-211ENST00000589753 TRPM6Q9BX84 2022 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms