RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 SIRPGQ9P1W8 387 aa12.04□□□□□ -0.48
CCBE1-203ENST00000589116 EPS15L1Q9UBC2 864 aa12.04□□□□□ -0.48
CCBE1-203ENST00000589116 DKK3Q9UBP4 350 aa12.04□□□□□ -0.48
CCBE1-203ENST00000589116 IL36AQ9UHA7 158 aa12.04□□□□□ -0.48
CCBE1-203ENST00000589116 APPL1Q9UKG1 709 aa12.04□□□□□ -0.48
CCBE1-203ENST00000589116 EMCNQ9ULC0 261 aa12.04□□□□□ -0.48
CCBE1-203ENST00000589116 ACOT9Q9Y305 439 aa12.04□□□□□ -0.48
CCBE1-203ENST00000589116 WASF2Q9Y6W5 498 aa12.04□□□□□ -0.48
CCBE1-203ENST00000589116 PRRT4C9JH25 899 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 PHGDHO43175 533 aaKnown RBP12.03□□□□□ -0.48
CCBE1-203ENST00000589116 IL1BP01584 269 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 PROCP04070 461 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 BPGMP07738 259 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 SLC26A3P40879 764 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 OPRD1P41143 372 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 TAS2R39P59534 338 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 XIAPP98170 497 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 KDSRQ06136 332 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 CACNG1Q06432 222 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 PEX6Q13608 980 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 SEMA3AQ14563 771 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 E2F5Q15329 346 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 ITPRIPL2Q3MIP1 535 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 RBM20Q5T481 1227 aaKnown RBP12.03□□□□□ -0.48
CCBE1-203ENST00000589116 HECTD2Q5U5R9 776 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 PARM1Q6UWI2 310 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 CERS6Q6ZMG9 384 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 NUDT18Q6ZVK8 323 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 STK40Q8N2I9 435 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 TTC8Q8TAM2 541 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 FGF14Q92915 247 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 NXPE3Q969Y0 559 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 EID2BQ96D98 161 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 KLHL32Q96NJ5 620 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 TRMT61BQ9BVS5 477 aaKnown RBP12.03□□□□□ -0.48
CCBE1-203ENST00000589116 MANSC1Q9H8J5 431 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 POPDC3Q9HBV1 291 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 SLC30A1Q9Y6M5 507 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 EDDM13A0A1B0GTR0 161 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 NPIPB15A6NHN6 443 aaPredicted RBP12.03□□□□□ -0.48
CCBE1-203ENST00000589116 NDUFS3O75489 264 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 TOP3BO95985 862 aaKnown RBP12.03□□□□□ -0.48
CCBE1-203ENST00000589116 CYP2A6P11509 494 aaPredicted RBP12.03□□□□□ -0.48
CCBE1-203ENST00000589116 NEFHP12036 1026 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 ZNF30P17039 623 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 SAT1P21673 171 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 GDI1P31150 447 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 PPARGP37231 505 aaPredicted RBP12.03□□□□□ -0.48
CCBE1-203ENST00000589116 HNRNPA1L2Q32P51 320 aaKnown RBP12.03□□□□□ -0.48
CCBE1-203ENST00000589116 FNDC3BQ53EP0 1204 aaKnown RBP12.03□□□□□ -0.48
CCBE1-203ENST00000589116 ZDHHC20Q5W0Z9 365 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 ATG16L1Q676U5 607 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 EP400NLQ6ZTU2 488 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 PIGWQ7Z7B1 504 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 TBC1D1Q86TI0 1168 aaPredicted RBP12.03□□□□□ -0.48
CCBE1-203ENST00000589116 LDB1Q86U70 411 aaPredicted RBP12.03□□□□□ -0.48
CCBE1-203ENST00000589116 NUDCD3Q8IVD9 361 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 CEP97Q8IW35 865 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 PLD6Q8N2A8 252 aaKnown RBP12.03□□□□□ -0.48
CCBE1-203ENST00000589116 CCDC63Q8NA47 563 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 RDH11Q8TC12 318 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 GRIN3AQ8TCU5 1115 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 SUSD6Q92537 303 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 LPGAT1Q92604 370 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 NDNQ99608 321 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 PITPNM3Q9BZ71 974 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 BRD9Q9H8M2 597 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 BPIFA1Q9NP55 256 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 TMEM216Q9P0N5 145 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 VWA7Q9Y334 891 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 STARD13Q9Y3M8 1113 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 COMMD10Q9Y6G5 202 aa12.03□□□□□ -0.48
CCBE1-203ENST00000589116 WDR91A4D1P6 747 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 UPK3BL1B0FP48 263 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 UPK3BL2E5RIL1 263 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 ARNTLO00327 626 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 EDF1O60869 148 aaKnown RBP12.02□□□□□ -0.49
CCBE1-203ENST00000589116 LEFTY1O75610 366 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 KLHL2O95198 593 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 CLDN7O95471 211 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 PRNPP04156 253 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 ITGALP20701 1170 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 CD9P21926 228 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 FDXRP22570 491 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 SPAM1P38567 509 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 SUOXP51687 545 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 ADARP55265 1226 aaKnown RBP12.02□□□□□ -0.49
CCBE1-203ENST00000589116 IRF9Q00978 393 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 PTPRRQ15256 657 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 ZNF805Q5CZA5 627 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 ZRANB3Q5FWF4 1079 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 LYPLAL1Q5VWZ2 237 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 C16orf46Q6P387 395 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 CRTC1Q6UUV9 634 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 MICALCLQ6ZW33 695 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 SPATS2Q86XZ4 545 aaKnown RBP12.02□□□□□ -0.49
CCBE1-203ENST00000589116 SUGP1Q8IWZ8 645 aaKnown RBP12.02□□□□□ -0.49
CCBE1-203ENST00000589116 CACNA2D3Q8IZS8 1091 aa12.02□□□□□ -0.49
CCBE1-203ENST00000589116 CENPLQ8N0S6 344 aaPredicted RBP12.02□□□□□ -0.49
CCBE1-203ENST00000589116 TTC1Q99614 292 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms