RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 FAM83DQ9H4H8 585 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 XAB2Q9HCS7 855 aaKnown RBP10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 CHRAC1Q9NRG0 131 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 AASDHPPTQ9NRN7 309 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 FKBPLQ9UIM3 349 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 RAB23Q9ULC3 237 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 FNDC3AQ9Y2H6 1198 aaKnown RBP10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 PKP3Q9Y446 797 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 TCAF1Q9Y4C2 921 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 HS3ST3A1Q9Y663 406 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 DMDP11532 3685 aa10.67□□□□□ -0.7
SMARCA4-213ENST00000587988 A0A1W2PR77 199 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 HEATR9A2RTY3 570 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 RGSL1A5PLK6 1076 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 SDR42E2A6NKP2 422 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 FADS2P1A8MWK0 482 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 PATE3B3GLJ2 98 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 SMAPO00193 183 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 AP3B1O00203 1094 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 GAPDHSO14556 408 aaPredicted RBP10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 FPGTO14772 594 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 GPR39O43194 453 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 SLU7O95391 586 aaKnown RBP10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 PSMA3P25788 255 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 NMBRP28336 390 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 CD38P28907 300 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 CSNK1EP49674 416 aaKnown RBP10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 ARSDP51689 593 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 RACK1P63244 317 aaKnown RBP10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 XIAPP98170 497 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 DPTQ07507 201 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 CALCOCO2Q13137 446 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 PEX6Q13608 980 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 STAT4Q14765 748 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 CHRNA6Q15825 494 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 BBS9Q3SYG4 887 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 HP1BP3Q5SSJ5 553 aaPredicted RBP10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 TPRG1LQ5T0D9 272 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 TSTD2Q5T7W7 516 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 LAIR1Q6GTX8 287 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 ESRP1Q6NXG1 681 aaKnown RBP10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 PNCKQ6P2M8 343 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 FAM151BQ6UXP7 276 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 ZNF765Q7L2R6 523 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 ABI3BPQ7Z7G0 1075 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 NLRP8Q86W28 1048 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 IGDCC3Q8IVU1 814 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 PPHLN1Q8NEY8 458 aaKnown RBP10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 OR13J1Q8NGT2 312 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 FBXO25Q8TCJ0 367 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 MFSD3Q96ES6 412 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 CDKN2AIPNLQ96HQ2 116 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 TBATAQ96M53 351 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 WDR83Q9BRX9 315 aaKnown RBP10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 KIFC1Q9BW19 673 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 SPATA16Q9BXB7 569 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 C1QTNF7Q9BXJ2 289 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 SMOC1Q9H4F8 434 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 SUDS3Q9H7L9 328 aaPredicted RBP10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 IL26Q9NPH9 171 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 FSCN3Q9NQT6 498 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 GDF3Q9NR23 364 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 ZDHHC18Q9NUE0 388 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 NLE1Q9NVX2 485 aaPredicted RBP10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 KCTD5Q9NXV2 234 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 TMPRSS11EQ9UL52 423 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 SOX13Q9UN79 622 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 OR1A2Q9Y585 309 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 MYO15AQ9UKN7 3530 aa10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 ZNF106Q9H2Y7 1883 aaKnown RBP10.66□□□□□ -0.7
SMARCA4-213ENST00000587988 A0A1B0GTW7 788 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 OR51F1A6NGY5 319 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 UGT1A9O60656 530 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 PPFIA2O75334 1257 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 LMNAP02545 664 aaKnown RBP10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 UGT1A6P19224 532 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 UGT1A1P22309 533 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 UGT1A4P22310 534 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 ECHS1P30084 290 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 UGT1A3P35503 534 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 UGT1A5P35504 534 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 TRIM23P36406 574 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 SPAM1P38567 509 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 MPLP40238 635 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 GPR1P46091 355 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 CARSP49589 748 aaKnown RBP10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 ARL4CP56559 192 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 DCDC1P59894 354 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 PFN3P60673 137 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 PDE1BQ01064 536 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 BNC1Q01954 994 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 NHLH1Q02575 133 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 RAET1GQ6H3X3 334 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 CASC4Q6P4E1 433 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 KYAT3Q6YP21 454 aaKnown RBP10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 Q6ZSR6 202 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 PTAR1Q7Z6K3 402 aaPredicted RBP10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 SLC22A18ASQ8N1D0 253 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 MFSD2AQ8NA29 543 aa10.65□□□□□ -0.7
SMARCA4-213ENST00000587988 OR13H1Q8NG92 308 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms