RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 MMP20O60882 483 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 CDH16O75309 829 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 RPP40O75818 363 aaKnown RBP14.89□□□□□ -0.03
NFIX-208ENST00000587260 VAPBO95292 243 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 C1SP09871 688 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 ZNF30P17039 623 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 HADHAP40939 763 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 LIG3P49916 1009 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 ARSDP51689 593 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 PTPN5P54829 565 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 ADGRD1Q6QNK2 874 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 MICALCLQ6ZW33 695 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 MARK2Q7KZI7 788 aaKnown RBP14.89□□□□□ -0.03
NFIX-208ENST00000587260 BMP8AQ7Z5Y6 402 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 KCNMB4Q86W47 210 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 C1orf210Q8IVY1 113 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 RAVER1Q8IY67 606 aaKnown RBP14.89□□□□□ -0.03
NFIX-208ENST00000587260 OR4K2Q8NGD2 314 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 OR13C4Q8NGS5 318 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 PGM2Q96G03 612 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 CDKN2AIPNLQ96HQ2 116 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 DNAJC1Q96KC8 554 aaKnown RBP14.89□□□□□ -0.03
NFIX-208ENST00000587260 C20orf96Q9NUD7 363 aaPredicted RBP14.89□□□□□ -0.03
NFIX-208ENST00000587260 LGALS13Q9UHV8 139 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 ZNF180Q9UJW8 692 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 ZDBF2Q9HCK1 2354 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 CACNA1IQ9P0X4 2223 aa14.89□□□□□ -0.03
NFIX-208ENST00000587260 TBC1D3DA0A087WVF3 549 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 TBC1D3IA0A087WXS9 549 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 TBC1D3EA0A087X179 549 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 TBC1D3KA0A087X1G2 549 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 IGHV1OR15-9A0A0B4J2B8 117 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 TBC1D3FA6NER0 549 aaPredicted RBP14.88□□□□□ -0.03
NFIX-208ENST00000587260 CXorf49A8MYA2 514 aaPredicted RBP14.88□□□□□ -0.03
NFIX-208ENST00000587260 TBC1D3LB9A6J9 549 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 AXIN1O15169 862 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 STX7O15400 261 aaKnown RBP14.88□□□□□ -0.03
NFIX-208ENST00000587260 AP1G1O43747 822 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 TBC1D3HP0C7X1 549 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 MYZAPP0CAP1 466 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 ERVK-10P10266 1014 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 C6P13671 934 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 PPP2CBP62714 309 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 PPP2CAP67775 309 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 PTSQ03393 145 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 CSTF1Q05048 431 aaKnown RBP14.88□□□□□ -0.03
NFIX-208ENST00000587260 KRT71Q3SY84 523 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 TMEM52BQ4KMG9 183 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 HSP90AA5PQ58FG0 334 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 TNFAIP8L3Q5GJ75 292 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 TEDDM1Q5T9Z0 273 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 SEL1L3Q68CR1 1132 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 TBC1D3GQ6DHY5 549 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 TBC1D3CQ6IPX1 549 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 LIPIQ6XZB0 460 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 MAMSTRQ6ZN01 415 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 RFLNAQ6ZTI6 216 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 HSD11B1LQ7Z5J1 315 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 SLC26A11Q86WA9 606 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 MAML2Q8IZL2 1156 aaPredicted RBP14.88□□□□□ -0.03
NFIX-208ENST00000587260 TBC1D3Q8IZP1 549 aaPredicted RBP14.88□□□□□ -0.03
NFIX-208ENST00000587260 EPS8L3Q8TE67 593 aaKnown RBP14.88□□□□□ -0.03
NFIX-208ENST00000587260 SCG3Q8WXD2 468 aaKnown RBP14.88□□□□□ -0.03
NFIX-208ENST00000587260 HDAC10Q969S8 669 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 TOE1Q96GM8 510 aaKnown RBP14.88□□□□□ -0.03
NFIX-208ENST00000587260 TBATAQ96M53 351 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 PAFAH2Q99487 392 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 TMBIM4Q9HC24 238 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 MED4Q9NPJ6 270 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 NSMCE4AQ9NXX6 385 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 ZFATQ9P243 1243 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 CD84Q9UIB8 345 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 PKP3Q9Y446 797 aa14.88□□□□□ -0.03
NFIX-208ENST00000587260 POC1B-GALNT4F8VUJ3 575 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 H0Y858 1186 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 TSPAN6O43657 245 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 RNGTTO60942 597 aaKnown RBP14.87□□□□□ -0.03
NFIX-208ENST00000587260 ZNF217O75362 1048 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 SEMA4FO95754 770 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 SYF2O95926 243 aaKnown RBP14.87□□□□□ -0.03
NFIX-208ENST00000587260 IGLV3-19P01714 112 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 CD6P30203 668 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 AVPR2P30518 371 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 MAT2AP31153 395 aaKnown RBP14.87□□□□□ -0.03
NFIX-208ENST00000587260 ETV3P41162 512 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 MSH2P43246 934 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 FNTBP49356 437 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 STC1P52823 247 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 PRAMEP78395 509 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 GPS2Q13227 327 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 EFTUD2Q15029 972 aaKnown RBP eCLIP14.87□□□□□ -0.033e-7■■■□□ 15.7
NFIX-208ENST00000587260 ACOX1Q15067 660 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 ZDHHC20Q5W0Z9 365 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 NEPROQ6NW34 567 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 GALNT7Q86SF2 657 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 PPM1NQ8N819 430 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 GPR150Q8NGU9 434 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 GABPB2Q8TAK5 448 aaPredicted RBP14.87□□□□□ -0.03
NFIX-208ENST00000587260 CALML6Q8TD86 181 aa14.87□□□□□ -0.03
NFIX-208ENST00000587260 DCAKDQ8WVC6 231 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms