RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 DRC3Q9H069 523 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 ZFYVE1Q9HBF4 777 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 SLC7A8Q9UHI5 535 aa12.43□□□□□ -0.42
SMARCA4-208ENST00000585799 ILVBLA1L0T0 632 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 G3V2L1 256 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 COL6A2P12110 1019 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 ARSAP15289 507 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 CREB5Q02930 508 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 PREPLQ4J6C6 727 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 BBS7Q8IWZ6 715 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 SH3RF2Q8TEC5 729 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 PKMYT1Q99640 499 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 EMILIN2Q9BXX0 1053 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 FBRSL1Q9HCM7 1045 aaKnown RBP12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 VPS51Q9UID3 782 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 SCOCQ9UIL1 159 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 MTF2Q9Y483 593 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 RGSL1A5PLK6 1076 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 PRAMEF1O95521 474 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 HGFP14210 728 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 TTPAP49638 278 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 TPD52P55327 224 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 BEND5Q7L4P6 421 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 MFSD1Q9H3U5 465 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 DLGAP2Q9P1A6 1054 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 SYCE1LA8MT33 242 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 ANKRD66B4E2M5 251 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 SH3BP5O60239 455 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 HIST1H2AGP0C0S8 130 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 HIST1H2ADP20671 130 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 PPM1AP35813 382 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 RING1Q06587 406 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 RALGDSQ12967 914 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 RIPK1Q13546 671 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 PITRM1Q5JRX3 1037 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 FAM219BQ5XKK7 198 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 CCDC149Q6ZUS6 474 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 NECAB2Q7Z6G3 386 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 SETD3Q86TU7 594 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 HIST1H2AHQ96KK5 128 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 KCNA7Q96RP8 456 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 HIST1H2AJQ99878 128 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 SIKE1Q9BRV8 207 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 H2AFJQ9BTM1 129 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 ATP13A3Q9H7F0 1226 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 F5P12259 2224 aa12.42□□□□□ -0.42
SMARCA4-208ENST00000585799 SNNO75324 88 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 KCNA5P22460 613 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 PRKAA2P54646 552 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 DLG1Q12959 904 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 CES4AQ5XG92 561 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 TPGS2Q68CL5 300 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 APCDD1Q8J025 514 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 FNDC5Q8NAU1 212 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 KLHL23Q8NBE8 558 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 OR9I1Q8NGQ6 314 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 ARRDC2Q8TBH0 407 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 ZNF419Q96HQ0 510 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 FAR2Q96K12 515 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 GORASP1Q9BQQ3 440 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 SPATA16Q9BXB7 569 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 TRIM54Q9BYV2 358 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 YIPF3Q9GZM5 350 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 DNAJC28Q9NX36 388 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 MRPS23Q9Y3D9 190 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 PTGDR2Q9Y5Y4 395 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 SYNCRIPO60506 623 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 MTX2O75431 263 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 TM7SF2O76062 418 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 S1PR4O95977 384 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 FGBP02675 491 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 CNPP09543 421 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 HSPA8P11142 646 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 TMEM154Q6P9G4 183 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 SH2D5Q6ZV89 423 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 SPATA17Q96L03 361 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 NSUN5Q96P11 429 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 CDK15Q96Q40 435 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 PSKH2Q96QS6 385 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 NUMBLQ9Y6R0 609 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 PRMT5O14744 637 aaPredicted RBP12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 AZIN1O14977 448 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 AKAP10O43572 662 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 TBC1D4O60343 1298 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 CLASP2O75122 1294 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 SORBS2O94875 1100 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 CLDN7O95471 211 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 IGLV3-25P01717 112 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 KCNK10P57789 538 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 IL1RL1Q01638 556 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 TRAF2Q12933 501 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 MTA1Q13330 715 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 PPP1R3AQ16821 1122 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 THEMIS2Q5TEJ8 643 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 UGT3A1Q6NUS8 523 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 ASRGL1Q7L266 308 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 PCYOX1LQ8NBM8 494 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 HHIPL1Q96JK4 782 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 SORT1Q99523 831 aa12.41□□□□□ -0.42
SMARCA4-208ENST00000585799 EME2A4GXA9 379 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms