RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 POLNQ7Z5Q5 900 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 TSPAN33Q86UF1 283 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 PDCD6IPQ8WUM4 868 aaKnown RBP14.42□□□□□ -0.1
SDF2-202ENST00000585428 PIH1D2Q8WWB5 315 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 SUDS3Q9H7L9 328 aaPredicted RBP14.42□□□□□ -0.1
SDF2-202ENST00000585428 ZWILCHQ9H900 591 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 OCIAD1Q9NX40 245 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 TMEM9Q9P0T7 183 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 A0A0U1RQS6 177 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 B4E171 279 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 FZD6O60353 706 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 PGLSO95336 258 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 PDHA1P08559 390 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 THRAP10827 490 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 LIFP15018 202 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 MPSTP25325 297 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 NFKBIAP25963 317 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 CSF2RBP32927 897 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 TSPAN7P41732 249 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 FASLGP48023 281 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 ATP1A2P50993 1020 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 MYL5Q02045 173 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 DPYSL2Q16555 572 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 PYCR3Q53H96 274 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 BOLA3Q53S33 107 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 COLEC12Q5KU26 742 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 BORAQ6PGQ7 559 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 BMPERQ8N8U9 685 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 ART4Q93070 314 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 ASPSCR1Q9BZE9 553 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 ABCG8Q9H221 673 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 SLC39A1Q9NY26 324 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 AIPL1Q9NZN9 384 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 PILRAQ9UKJ1 303 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 TMEM98Q9Y2Y6 226 aa14.41□□□□□ -0.1
SDF2-202ENST00000585428 UBR5O95071 2799 aaPredicted RBP14.4□□□□□ -0.1
SDF2-202ENST00000585428 CSTF2P33240 577 aaKnown RBP eCLIP14.4□□□□□ -0.12e-9■■■■□ 26.3
SDF2-202ENST00000585428 ACTR1BP42025 376 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 ACTR1AP61163 376 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 MAXP61244 160 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 GPLD1P80108 840 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 ZNF235Q14590 738 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 ARMC12Q5T9G4 340 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 MARC1Q5VT66 337 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 RAET1GQ6H3X3 334 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 ADAMTSL4Q6UY14 1074 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 ZNF571Q7Z3V5 609 aaPredicted RBP14.4□□□□□ -0.1
SDF2-202ENST00000585428 ARHGAP22Q7Z5H3 698 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 TEX26Q8N6G2 289 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 IL22RA1Q8N6P7 574 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 CSPG4P5Q96PW8 444 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 HAUS4Q9H6D7 363 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 ANO10Q9NW15 660 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 KCNK4Q9NYG8 393 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 CNOT8Q9UFF9 292 aaKnown RBP14.4□□□□□ -0.1
SDF2-202ENST00000585428 TUBD1Q9UJT1 453 aa14.4□□□□□ -0.1
SDF2-202ENST00000585428 TRBV23OR9-2A0A075B6M9 112 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 H3BRJ5 948 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 DDX3XO00571 662 aaKnown RBP eCLIP14.39□□□□□ -0.112e-8■■□□□ 13
SDF2-202ENST00000585428 TCF4P15884 667 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 CTPS1P17812 591 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 IL4RP24394 825 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 MMP13P45452 471 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 GPR1P46091 355 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 TLE1Q04724 770 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 BIRC2Q13490 618 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 IHHQ14623 411 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.39□□□□□ -0.11
SDF2-202ENST00000585428 DCAF12Q5T6F0 453 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 WDR74Q6RFH5 385 aaPredicted RBP14.39□□□□□ -0.11
SDF2-202ENST00000585428 TMCO3Q6UWJ1 677 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 USP45Q70EL2 814 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 CACNA2D3Q8IZS8 1091 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 SFRP1Q8N474 314 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 CCDC112Q8NEF3 446 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 SCAMP4Q969E2 229 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 AP2M1Q96CW1 435 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 COX14Q96I36 57 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 SLC45A3Q96JT2 553 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 OR2M4Q96R27 311 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 AGAP2Q99490 1192 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 ISCUQ9H1K1 167 aa14.39□□□□□ -0.11
SDF2-202ENST00000585428 GOLGA6CA6NDK9 693 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 GOLGA6BA6NDN3 693 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 LRRC53A6NM62 1247 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 EFCAB7A8K855 629 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 CAPN5O15484 640 aaPredicted RBP14.38□□□□□ -0.11
SDF2-202ENST00000585428 EML2O95834 649 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 GOLGA6DP0CG33 693 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 RARAP10276 462 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 ARL4AP40617 200 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 PRKCIP41743 596 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 CDH6P55285 790 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 POLE2P56282 527 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 RAB15P59190 212 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 MC2RQ01718 297 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 KCNAB2Q13303 367 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 LRP8Q14114 963 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 LRRC66Q68CR7 880 aa14.38□□□□□ -0.11
SDF2-202ENST00000585428 ANKS6Q68DC2 871 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms