RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 MC4RP32245 332 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 TPMTP51580 245 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 TMPRSS15P98073 1019 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 MTAPQ13126 283 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 THOC5Q13769 683 aaKnown RBP16.09■□□□□ 0.17
SS18-226ENST00000585241 TYSND1Q2T9J0 566 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 NEK5Q6P3R8 708 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 NLRP8Q86W28 1048 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 RIBC1Q8N443 379 aaPredicted RBP16.09■□□□□ 0.17
SS18-226ENST00000585241 GPR26Q8NDV2 337 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 FLCNQ8NFG4 579 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 OR6P1Q8NGX9 317 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 OR4L1Q8NH43 312 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 GABPB2Q8TAK5 448 aaPredicted RBP16.09■□□□□ 0.17
SS18-226ENST00000585241 CXorf40AQ8TE69 158 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 HMGB4Q8WW32 186 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 DTD2Q96FN9 168 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 MCMBPQ9BTE3 642 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 SUDS3Q9H7L9 328 aaPredicted RBP16.09■□□□□ 0.17
SS18-226ENST00000585241 ZFATQ9P243 1243 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 EBF1Q9UH73 591 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 ZNF180Q9UJW8 692 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 LRRK1Q38SD2 2015 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 TRBV5-4A0A0C4DH59 114 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 GLYATL1P3A0A0U1RQE8 302 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 OR51F1A6NGY5 319 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 NEMP1O14524 444 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 WNT9AO14904 365 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 APBB3O95704 486 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 PDGFBP01127 241 aaPredicted RBP16.08■□□□□ 0.16
SS18-226ENST00000585241 DCNP07585 359 aaKnown RBP16.08■□□□□ 0.16
SS18-226ENST00000585241 CACNG1Q06432 222 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 IFFO1Q0D2I5 559 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 HENMT1Q5T8I9 393 aaKnown RBP16.08■□□□□ 0.16
SS18-226ENST00000585241 KIAA1161Q6NSJ0 714 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 ADGRD1Q6QNK2 874 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 RFLNAQ6ZTI6 216 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 Q6ZVL8 140 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 PTAR1Q7Z6K3 402 aaPredicted RBP16.08■□□□□ 0.16
SS18-226ENST00000585241 CILP2Q8IUL8 1156 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 CNPY4Q8N129 248 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 CAMKK1Q8N5S9 505 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 PPM1NQ8N819 430 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 C2CD4AQ8NCU7 369 aaPredicted RBP16.08■□□□□ 0.16
SS18-226ENST00000585241 DCAKDQ8WVC6 231 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 HHIPQ96QV1 700 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 PAFAH2Q99487 392 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 AGAP2Q99490 1192 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 CPNE1Q99829 537 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 WRAP53Q9BUR4 548 aaKnown RBP16.08■□□□□ 0.16
SS18-226ENST00000585241 SGK2Q9HBY8 427 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 IARS2Q9NSE4 1012 aaKnown RBP16.08■□□□□ 0.16
SS18-226ENST00000585241 CATSPERZQ9NTU4 200 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 SMOXQ9NWM0 555 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 KCTD5Q9NXV2 234 aa16.08■□□□□ 0.16
SS18-226ENST00000585241 MARCH4Q9P2E8 410 aaPredicted RBP16.08■□□□□ 0.16
SS18-226ENST00000585241 GOLGA8KD6RF30 607 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 GOLGA8TH3BQL2 631 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 RASGRF2O14827 1237 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 CD3EAPO15446 510 aaKnown RBP16.07■□□□□ 0.16
SS18-226ENST00000585241 CDH16O75309 829 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 PIAS1O75925 651 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 SRP72O76094 671 aaKnown RBP16.07■□□□□ 0.16
SS18-226ENST00000585241 RECQL5O94762 991 aaPredicted RBP16.07■□□□□ 0.16
SS18-226ENST00000585241 PRAMEF1O95521 474 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 GP5P40197 560 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 ETV3P41162 512 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 SLC1A2P43004 574 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 CCR3P51677 355 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 CLCN5P51795 746 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 CSE1LP55060 971 aaKnown RBP16.07■□□□□ 0.16
SS18-226ENST00000585241 DPTQ07507 201 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 MAP7D1Q3KQU3 841 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 GPR33Q49SQ1 333 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 TMEM259Q4ZIN3 620 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 CEP85LQ5SZL2 805 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 ZNF470Q6ECI4 717 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 ANO7Q6IWH7 933 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 MRNIPQ6NTE8 343 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 PACS1Q6VY07 963 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 MICALCLQ6ZW33 695 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 SNX20Q7Z614 316 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 CTAGE3PQ8IX95 158 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 TRAM1L1Q8N609 369 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 EPS8L3Q8TE67 593 aaKnown RBP16.07■□□□□ 0.16
SS18-226ENST00000585241 GANCQ8TET4 914 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 ASB12Q8WXK4 309 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 TCF12Q99081 682 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 SH3GL2Q99962 352 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 ABCG8Q9H221 673 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 ACBD3Q9H3P7 528 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 FAM83DQ9H4H8 585 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 CD93Q9NPY3 652 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 PPANQ9NQ55 473 aaKnown RBP16.07■□□□□ 0.16
SS18-226ENST00000585241 SLC17A6Q9P2U8 582 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 PSMC3IPQ9P2W1 217 aaPredicted RBP16.07■□□□□ 0.16
SS18-226ENST00000585241 LGALS13Q9UHV8 139 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 FBXO5Q9UKT4 447 aa16.07■□□□□ 0.16
SS18-226ENST00000585241 ZFR2Q9UPR6 939 aaKnown RBP16.07■□□□□ 0.16
SS18-226ENST00000585241 PSAT1Q9Y617 370 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms