RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 MPSTP25325 297 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 WNT3AP56704 352 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 MRPS5P82675 430 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CERCAMQ5T4B2 595 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 POMZP3Q6PJE2 187 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 AKAP14Q86UN6 197 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 PTCD2Q8WV60 388 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 TSSK3Q96PN8 268 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 SLC27A6Q9Y2P4 619 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 PRKAB1Q9Y478 270 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 AREL1O15033 823 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 MAGEB3O15480 346 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 GMFGO60234 142 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 TRBC1P01850 177 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 HOXC6P09630 235 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 VEGFAP15692 232 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 MATKP42679 507 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CPTPQ5TA50 214 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 APOBEC3HQ6NTF7 200 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 FAM124AQ86V42 546 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 GSDMCQ9BYG8 508 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 IMP3Q9NV31 184 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 DDX3YO15523 660 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 FGF1P05230 155 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 ELFN1P0C7U0 828 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 MNDAP41218 407 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 SSR2P43308 183 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CXCR3P49682 368 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 SUZ12Q15022 739 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 TARBP2Q15633 366 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 AAGABQ6PD74 315 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 OLFML1Q6UWY5 402 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 HTRA1Q92743 480 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 RTKNQ9BST9 563 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 ACSS2Q9NR19 701 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 ARL8BQ9NVJ2 186 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 DMTF1Q9Y222 760 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 DHRS7Q9Y394 339 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 BTNL10A8MVZ5 291 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 MAFO75444 373 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 LYNP07948 512 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 PPIBP23284 216 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CYP4F8P98187 520 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 IL18Q14116 193 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 ULK3Q6PHR2 472 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 SPPL2CQ8IUH8 684 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 SHC3Q92529 594 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 HAS1Q92839 578 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CNOT6Q9ULM6 557 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CLUHO75153 1309 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CDH5P33151 784 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CTNNB1P35222 781 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 MTHFRP42898 656 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 FAM35AQ86V20 835 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 C2orf73Q8N5S3 287 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CERKQ8TCT0 537 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 WDR18Q9BV38 432 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 C3orf14Q9HBI5 128 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 ZNF214Q9UL59 606 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 ZNF490Q9ULM2 529 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 ST3GAL5Q9UNP4 418 aa13.24□□□□□ -0.29
RAB11FIP4-210ENST00000585058 C2orf71A6NGG8 1288 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 B4GALT5O43286 388 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 GJB1P08034 283 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CBX2Q14781 532 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 C9orf64Q5T6V5 341 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 VSIG10LQ86VR7 867 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 OR10H5Q8NGA6 315 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 P2RY11Q96G91 374 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 FCRL2Q96LA5 508 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 WDR12Q9GZL7 423 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 SAMD4AQ9UPU9 718 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 H3BNH8 94 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 TFPIP10646 304 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 AKT2P31751 481 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CCL23P55773 120 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 MADCAM1Q13477 382 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 VGLL4Q14135 290 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 SNAP47Q5SQN1 464 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CHSY3Q70JA7 882 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 RAVER1Q8IY67 606 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CFAP52Q8N1V2 620 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 EVA1BQ9NVM1 165 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 ITGB1BP2Q9UKP3 347 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 IKZF2Q9UKS7 526 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 TLR5O60602 858 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 EDF1O60869 148 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CABYRO75952 493 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 FGBP02675 491 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 CBX3Q13185 183 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 SULT1C3Q6IMI6 304 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 TRABD2AQ86V40 505 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 RALGPS2Q86X27 583 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 TBC1D21Q8IYX1 336 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 PQLC1Q8N2U9 271 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 NAT16Q8N8M0 369 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 PDP1Q9P0J1 537 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 ALOX15BO15296 676 aa13.23□□□□□ -0.29
RAB11FIP4-210ENST00000585058 BPGMP07738 259 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms