RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 HLA-DPA1P20036 260 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 GEMP55040 296 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 DCDC1P59894 354 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 OASLQ15646 514 aaKnown RBP16.19■□□□□ 0.18
ERBB2-222ENST00000584908 SLC1A5Q15758 541 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 PRRT3Q5FWE3 981 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 HENMT1Q5T8I9 393 aaKnown RBP16.19■□□□□ 0.18
ERBB2-222ENST00000584908 FAXCQ5TGI0 409 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 KCTD16Q68DU8 428 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 RAET1GQ6H3X3 334 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 HEATR4Q86WZ0 1026 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 REXO1L1PQ8IX06 675 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 FSTL5Q8N475 847 aaPredicted RBP16.19■□□□□ 0.18
ERBB2-222ENST00000584908 OR1E3Q8WZA6 343 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 SCAMP4Q969E2 229 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 TSACCQ96A04 125 aaPredicted RBP16.19■□□□□ 0.18
ERBB2-222ENST00000584908 COX14Q96I36 57 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 FRMD8Q9BZ67 464 aaPredicted RBP16.19■□□□□ 0.18
ERBB2-222ENST00000584908 CLPBQ9H078 707 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 TRABDQ9H4I3 376 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 FGF22Q9HCT0 170 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 RAD18Q9NS91 495 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 CD84Q9UIB8 345 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 AAR2Q9Y312 384 aaKnown RBP16.19■□□□□ 0.18
ERBB2-222ENST00000584908 ZNF711Q9Y462 761 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 ACACBO00763 2458 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 ZNF106Q9H2Y7 1883 aaKnown RBP16.19■□□□□ 0.18
ERBB2-222ENST00000584908 FAM221BA6H8Z2 402 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 FGF1P05230 155 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 CEACAM5P06731 702 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 PIRTP0C851 137 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 CDK4P11802 303 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 CKMT2P17540 419 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 ACP1P24666 158 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 PSMB4P28070 264 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 ADRA1AP35348 466 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 HMGCLP35914 325 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 GPR1P46091 355 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 ACADVLP49748 655 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 ILKQ13418 452 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 ELOCQ15369 112 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 SIRPB2Q5JXA9 342 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 ZCCHC8Q6NZY4 707 aaKnown RBP16.19■□□□□ 0.18
ERBB2-222ENST00000584908 LVRNQ6Q4G3 990 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 RANBP10Q6VN20 620 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 NYAP1Q6ZVC0 841 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 HID1Q8IV36 788 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 CCDC110Q8TBZ0 833 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 LMX1AQ8TE12 382 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 PDXPQ96GD0 296 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 SCARF2Q96GP6 870 aaPredicted RBP16.19■□□□□ 0.18
ERBB2-222ENST00000584908 RIOK2Q9BVS4 552 aaKnown RBP16.19■□□□□ 0.18
ERBB2-222ENST00000584908 FAM83DQ9H4H8 585 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 HACD3Q9P035 362 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 SLC17A4Q9Y2C5 497 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 SPO11Q9Y5K1 396 aa16.19■□□□□ 0.18
ERBB2-222ENST00000584908 ARHGEF17Q96PE2 2063 aaPredicted RBP16.18■□□□□ 0.18
ERBB2-222ENST00000584908 FRYQ5TBA9 3013 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 ZFC3H1O60293 1989 aaKnown RBP16.18■□□□□ 0.18
ERBB2-222ENST00000584908 PLXNB3Q9ULL4 1909 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 LY6G6EA0A0G2JKS1 128 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 PRSS38A1L453 326 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 FFAR2O15552 330 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 ZSCAN12O43309 604 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 LIASO43766 372 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 TNFP01375 233 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 CKMT1AP12532 417 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 STIP1P31948 543 aaKnown RBP16.18■□□□□ 0.18
ERBB2-222ENST00000584908 DNAJC3Q13217 504 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 SIX1Q15475 284 aaPredicted RBP16.18■□□□□ 0.18
ERBB2-222ENST00000584908 HS1BP3Q53T59 392 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 TTC30BQ8N4P2 665 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 FAM71DQ8N9W8 422 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 IPMKQ8NFU5 416 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 AGAP2Q99490 1192 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 TMEM121Q9BTD3 319 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 BOCQ9BWV1 1114 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 FSD1LQ9BXM9 530 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 ANGPTL2Q9UKU9 493 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 SHOC2Q9UQ13 582 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 ZKSCAN5Q9Y2L8 839 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 JRKLQ9Y4A0 524 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 U3KQA8 63 aa16.18■□□□□ 0.18
ERBB2-222ENST00000584908 TPRP12270 2363 aaKnown RBP16.17■□□□□ 0.18
ERBB2-222ENST00000584908 ASXL3Q9C0F0 2248 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 F5H423 210 aaPredicted RBP16.17■□□□□ 0.18
ERBB2-222ENST00000584908 AURKAO14965 403 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 FUCA1P04066 466 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 IVLP07476 585 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 CHRNA4P43681 627 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 TNNT3P45378 269 aaPredicted RBP16.17■□□□□ 0.18
ERBB2-222ENST00000584908 GDF10P55107 478 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 FOXC1Q12948 553 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 PRPSAP1Q14558 356 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 PARP6Q2NL67 630 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 KCTD11Q693B1 232 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 PDPK2PQ6A1A2 396 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 DRICH1Q6PGQ1 229 aaPredicted RBP16.17■□□□□ 0.18
ERBB2-222ENST00000584908 PNPLA1Q8N8W4 532 aa16.17■□□□□ 0.18
ERBB2-222ENST00000584908 GPR26Q8NDV2 337 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms