RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 PPP1R21Q6ZMI0 780 aa15.98■□□□□ 0.15
CSNK1D-223ENST00000584472 DPPA4Q7L190 304 aa15.98■□□□□ 0.15
CSNK1D-223ENST00000584472 ABI3BPQ7Z7G0 1075 aa15.98■□□□□ 0.15
CSNK1D-223ENST00000584472 KLK6Q92876 244 aa15.98■□□□□ 0.15
CSNK1D-223ENST00000584472 SMIM14Q96QK8 99 aa15.98■□□□□ 0.15
CSNK1D-223ENST00000584472 MCCC1Q96RQ3 725 aaPredicted RBP15.98■□□□□ 0.15
CSNK1D-223ENST00000584472 WRAP53Q9BUR4 548 aaKnown RBP15.98■□□□□ 0.15
CSNK1D-223ENST00000584472 WASF3Q9UPY6 502 aa15.98■□□□□ 0.15
CSNK1D-223ENST00000584472 HS3ST3A1Q9Y663 406 aa15.98■□□□□ 0.15
CSNK1D-223ENST00000584472 PCNX2A6NKB5 2137 aa15.98■□□□□ 0.15
CSNK1D-223ENST00000584472 SCN8AQ9UQD0 1980 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 CAPN8A6NHC0 703 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 GOLGA8MH3BSY2 632 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 AP3B1O00203 1094 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 MMP20O60882 483 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 TM7SF2O76062 418 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 PAK4O96013 591 aaPredicted RBP15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 HNF1BP35680 557 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 LIG3P49916 1009 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 NXPH1P58417 271 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 FAM193AP78312 1265 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 MSLNQ13421 630 aaPredicted RBP15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 AGERQ15109 404 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 PTPRRQ15256 657 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 ZNF423Q2M1K9 1284 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 HLA-BQ31612 363 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 KYAT3Q6YP21 454 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 USP45Q70EL2 814 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 CAND1Q86VP6 1230 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 DNAAF3Q8N9W5 541 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 ART4Q93070 314 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 SERPINB12Q96P63 405 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 LYSMD1Q96S90 227 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 KLF6Q99612 283 aaPredicted RBP15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 ERVMER34-1Q9H9K5 563 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 GDF3Q9NR23 364 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 FAM114A2Q9NRY5 505 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 PIH1D1Q9NWS0 290 aaKnown RBP15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 SNX11Q9Y5W9 270 aa15.97■□□□□ 0.15
CSNK1D-223ENST00000584472 NPIPB15A6NHN6 443 aaPredicted RBP15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 A6NNZ2 444 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 TRIM16O95361 564 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 PIRTP0C851 137 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 MLNP12872 115 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 C6P13671 934 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 PLTPP55058 493 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 SEMG2Q02383 582 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 CAV1Q03135 178 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 RALGDSQ12967 914 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 UAP1L1Q3KQV9 507 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 ZDHHC24Q6UX98 284 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 GCNT7Q6ZNI0 430 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 DCP2Q8IU60 420 aaKnown RBP15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 IFT20Q8IY31 132 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 OXR1Q8N573 874 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 UBXN4Q92575 508 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 KLHDC7BQ96G42 594 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 MYOCQ99972 504 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 FRMD8Q9BZ67 464 aaPredicted RBP15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 GAREM1Q9H706 876 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 MAGEE1Q9HCI5 957 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 XAB2Q9HCS7 855 aaKnown RBP15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 FZD3Q9NPG1 666 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 B4GALT6Q9UBX8 382 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 PCDHGB2Q9Y5G2 931 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 SPO11Q9Y5K1 396 aa15.96■□□□□ 0.15
CSNK1D-223ENST00000584472 TMEM131Q92545 1883 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 CACNA1BQ00975 2339 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 FPGTO14772 594 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 RAD51BO15315 384 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 AVILO75366 819 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 ELFN1P0C7U0 828 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 CYP2A6P11509 494 aaPredicted RBP15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 CD59P13987 128 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 TPH1P17752 444 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 LHCGRP22888 699 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 VIPR1P32241 457 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 MAGEA3P43357 314 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 CDKN3Q16667 212 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 CERCAMQ5T4B2 595 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 CRTC1Q6UUV9 634 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 LIPIQ6XZB0 460 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 OR2I1PQ8NGU4 316 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 FBXO25Q8TCJ0 367 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 BLOC1S5Q8TDH9 187 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 CENPTQ96BT3 561 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 SRPK1Q96SB4 655 aaKnown RBP15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 ANKZF1Q9H8Y5 726 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 GPR27Q9NS67 375 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 ZDHHC18Q9NUE0 388 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 HACD3Q9P035 362 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.95■□□□□ 0.141e-7■□□□□ 10.2
CSNK1D-223ENST00000584472 CA5BQ9Y2D0 317 aa15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 FNDC3AQ9Y2H6 1198 aaKnown RBP15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 V9GYY5 206 aaPredicted RBP15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 MAP1BP46821 2468 aaKnown RBP15.95■□□□□ 0.14
CSNK1D-223ENST00000584472 USP24Q9UPU5 2620 aa15.94■□□□□ 0.14
CSNK1D-223ENST00000584472 POM121BA6NF01 834 aa15.94■□□□□ 0.14
CSNK1D-223ENST00000584472 A8MX80 341 aa15.94■□□□□ 0.14
CSNK1D-223ENST00000584472 H0Y8X5 98 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms