RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 JAKMIP3Q5VZ66 844 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 CCDC174Q6PII3 467 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 CWC27Q6UX04 472 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 CCDC186Q7Z3E2 898 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 CREBRFQ8IUR6 639 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 DCUN1D3Q8IWE4 304 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 GALNT15Q8N3T1 639 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 RASSF8Q8NHQ8 419 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 DNAAF4Q8WXU2 420 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 SKA1Q96BD8 255 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 MPP4Q96JB8 637 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 TRAPPC9Q96Q05 1148 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 CLSTN2Q9H4D0 955 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 ZSCAN16Q9H4T2 348 aaPredicted RBP4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 PLEKHA2Q9HB19 425 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 IL1RAPL2Q9NP60 686 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 HMG20BQ9P0W2 317 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 LRFN1Q9P244 771 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 CGNQ9P2M7 1197 aaKnown RBP4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 RCOR1Q9UKL0 485 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 PCDHAC2Q9Y5I4 1007 aa4.16□□□□□ -1.74
SMCHD1-208ENST00000583344 TMEM94Q12767 1356 aa4.15□□□□□ -1.74
SMCHD1-208ENST00000583344 JCADQ9P266 1359 aa4.15□□□□□ -1.74
SMCHD1-208ENST00000583344 TMEM2Q9UHN6 1383 aa4.15□□□□□ -1.74
SMCHD1-208ENST00000583344 HEG1Q9ULI3 1381 aa4.15□□□□□ -1.74
SMCHD1-208ENST00000583344 PLEKHG1Q9ULL1 1385 aa4.15□□□□□ -1.74
SMCHD1-208ENST00000583344 OR6C68A6NDL8 312 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 FAM157AC9JC47 383 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 KIF2AO00139 706 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 KIF1CO43896 1103 aaKnown RBP4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 TNNT1P13805 278 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 CD72P21854 359 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 DGKAP23743 735 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 HOXC9P31274 260 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 SERPINF1P36955 418 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 AMPHP49418 695 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 MVDP53602 400 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 TNFAIP2Q03169 654 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 FAM27E3Q08E93 113 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 BYSLQ13895 437 aaKnown RBP4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 SIM2Q14190 667 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 KRT32Q14532 448 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 NCAPH2Q6IBW4 605 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 ZNF280DQ6N043 979 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 ZSCAN25Q6NSZ9 544 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 MAATS1Q7Z4T9 603 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 EXOC3L1Q86VI1 746 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 CCDC83Q8IWF9 413 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 LRRC8AQ8IWT6 810 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 FBXL16Q8N461 479 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 AADATQ8N5Z0 425 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 FSIP1Q8NA03 581 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 STT3BQ8TCJ2 826 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 JAKMIP1Q96N16 626 aaKnown RBP4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 LLPHQ9BRT6 129 aaKnown RBP4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 TNMDQ9H2S6 317 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 TMLHEQ9NVH6 421 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 HDAC6Q9UBN7 1215 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 FBXO2Q9UK22 296 aaPredicted RBP4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 CFAP45Q9UL16 551 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 PCDHGB3Q9Y5G1 929 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 CHD2O14647 1828 aaKnown RBP4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 USP54Q70EL1 1684 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 TCHHQ07283 1943 aa4.15□□□□□ -1.75
SMCHD1-208ENST00000583344 NWD1Q149M9 1564 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 FAM208AQ9UK61 1670 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 PI4KAP2A4QPH2 592 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 H0Y3Z8 333 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 FIBPO43427 364 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 TIMM44O43615 452 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 SLC25A17O43808 307 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 VNN2O95498 520 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 AGR2O95994 175 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 IL1AP01583 271 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 CTPS1P17812 591 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 PNPLA4P41247 253 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 NCBP1Q09161 790 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 LPIN1Q14693 890 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 RPE65Q16518 533 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 TUBB8Q3ZCM7 444 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 FAM69BQ5VUD6 431 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 NAA16Q6N069 864 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 PGBD2Q6P3X8 592 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 BLOC1S2Q6QNY1 142 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 LDHAL6AQ6ZMR3 332 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 RINLQ6ZS11 566 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 MB21D2Q8IYB1 491 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 C17orf53Q8N3J3 647 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 MYCT1Q8N699 235 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 PI4KAP1Q8N8J0 262 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 GPATCH11Q8N954 259 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 TRIB2Q92519 343 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 CD101Q93033 1021 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 DDX23Q9BUQ8 820 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 AGXT2Q9BYV1 514 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 WDR12Q9GZL7 423 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 EVA1AQ9H8M9 152 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 TLR8Q9NR97 1041 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 SAGE1Q9NXZ1 904 aa4.14□□□□□ -1.75
SMCHD1-208ENST00000583344 DACT1Q9NYF0 836 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms