RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 TLE2Q04725 743 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 STXBP5Q5T5C0 1151 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 DUS1LQ6P1R4 473 aaKnown RBP3.92□□□□□ -1.78
COPS3-217ENST00000583160 QSOX2Q6ZRP7 698 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 KCTD8Q6ZWB6 473 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 HAPLN4Q86UW8 402 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 UBXN10Q96LJ8 280 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 PCYT2Q99447 389 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 LRRC1Q9BTT6 524 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 FKRPQ9H9S5 495 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 PPP1R14DQ9NXH3 145 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 OR2W1Q9Y3N9 320 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 DVL1O14640 695 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 TSPAN4O14817 238 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 FTCDO95954 541 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 SERPINB2P05120 415 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 POLBP06746 335 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 PRSS1P07477 247 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 HNRNPA1P09651 372 aaKnown RBP eCLIP3.91□□□□□ -1.78
COPS3-217ENST00000583160 DVL1P1P54792 670 aaPredicted RBP3.91□□□□□ -1.78
COPS3-217ENST00000583160 GTF2H2Q13888 395 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 GPR68Q15743 365 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 CCDC96Q2M329 555 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 PDSS1Q5T2R2 415 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 GTF2H2CQ6P1K8 395 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 CYP26C1Q6V0L0 522 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 ZNF852Q6ZMS4 543 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 ASB18Q6ZVZ8 466 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 GRAPLQ8TC17 118 aaPredicted RBP3.91□□□□□ -1.78
COPS3-217ENST00000583160 HVCN1Q96D96 273 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 KIF1BPQ96EK5 621 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 ZNF583Q96ND8 569 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 SYT17Q9BSW7 474 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 MPP6Q9NZW5 540 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 CEPT1Q9Y6K0 416 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 CECR2Q9BXF3 1484 aa3.91□□□□□ -1.78
COPS3-217ENST00000583160 USP17L23D6RBM5 183 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 WDR1O75083 606 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 APOHP02749 345 aaPredicted RBP3.9□□□□□ -1.79
COPS3-217ENST00000583160 ATP12AP54707 1039 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 KRTAP10-5P60370 271 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 EEF1A1P68104 462 aaKnown RBP3.9□□□□□ -1.79
COPS3-217ENST00000583160 GALNT2Q10471 571 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 TRPC3Q13507 836 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 EEF1A1P5Q5VTE0 462 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 PCDH20Q8N6Y1 951 aaKnown RBP3.9□□□□□ -1.79
COPS3-217ENST00000583160 KLHL29Q96CT2 875 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 ZNF501Q96CX3 271 aaPredicted RBP3.9□□□□□ -1.79
COPS3-217ENST00000583160 ORAI1Q96D31 301 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 SCLT1Q96NL6 688 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 IFIH1Q9BYX4 1025 aaKnown RBP3.9□□□□□ -1.79
COPS3-217ENST00000583160 ZNF696Q9H7X3 374 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 VEZTQ9HBM0 779 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 TBX20Q9UMR3 447 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 FAF1Q9UNN5 650 aaPredicted RBP3.9□□□□□ -1.79
COPS3-217ENST00000583160 DGKBQ9Y6T7 804 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 UTYO14607 1347 aa3.9□□□□□ -1.79
COPS3-217ENST00000583160 LDLRAD4O15165 306 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 EDIL3O43854 480 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 SEC31AO94979 1220 aaKnown RBP3.89□□□□□ -1.79
COPS3-217ENST00000583160 HOXB5P09067 269 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 TERF1P54274 439 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 VAMP2P63027 116 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 CSNK2A1P68400 391 aaPredicted RBP3.89□□□□□ -1.79
COPS3-217ENST00000583160 FOXM1Q08050 763 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 SREBF2Q12772 1141 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 BAK1Q16611 211 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 PQLC2Q6ZP29 291 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 SLC46A3Q7Z3Q1 461 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 WDSUB1Q8N9V3 476 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 CSNK2A3Q8NEV1 391 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 HMGCLL1Q8TB92 370 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 PIGTQ969N2 578 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 POLR3CQ9BUI4 534 aaPredicted RBP3.89□□□□□ -1.79
COPS3-217ENST00000583160 DDX43Q9NXZ2 648 aaKnown RBP3.89□□□□□ -1.79
COPS3-217ENST00000583160 GGA3Q9NZ52 723 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 KCND2Q9NZV8 630 aa3.89□□□□□ -1.79
COPS3-217ENST00000583160 A0A1W2PQM1 296 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 TTC36A6NLP5 189 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 LRRC53A6NM62 1247 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 LDLRP01130 860 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 EGFP01133 1207 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 CDAP32320 146 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 CCT5P48643 541 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 VEGFCP49767 419 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 FGFBP1Q14512 234 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 ZNF234Q14588 700 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 COL28A1Q2UY09 1125 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 SIRPB2Q5JXA9 342 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 SIGIRRQ6IA17 410 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 ZNF280DQ6N043 979 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 BRAT1Q6PJG6 821 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 BEST3Q8N1M1 668 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 RHBDF1Q96CC6 855 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 GRAMD2BQ96HH9 432 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 QRFPRQ96P65 431 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 FAM118AQ9NWS6 357 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 DLGAP4Q9Y2H0 992 aa3.88□□□□□ -1.79
COPS3-217ENST00000583160 AAR2Q9Y312 384 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms