RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 CAPN6Q9Y6Q1 641 aa13.93□□□□□ -0.18
GGA3-215ENST00000582821 UNC13CQ8NB66 2214 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 C1orf232A0A0U1RR37 186 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 EME2A4GXA9 379 aaPredicted RBP13.92□□□□□ -0.18
GGA3-215ENST00000582821 FTCDO95954 541 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 SOD1P00441 154 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 CEACAM5P06731 702 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 RBP3P10745 1247 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 NFKB1P19838 968 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 GPR1P46091 355 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 MPP3Q13368 585 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 DEFB133Q30KQ1 61 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 C6orf132Q5T0Z8 1188 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 KCTD16Q68DU8 428 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 RAET1GQ6H3X3 334 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 CCDC70Q6NSX1 233 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 NYAP1Q6ZVC0 841 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 RD3Q7Z3Z2 195 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 TMC3Q7Z5M5 1100 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 GKN2Q86XP6 184 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 CDKL3Q8IVW4 592 aaPredicted RBP13.92□□□□□ -0.18
GGA3-215ENST00000582821 SCG3Q8WXD2 468 aaKnown RBP13.92□□□□□ -0.18
GGA3-215ENST00000582821 SCAMP4Q969E2 229 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 EID2BQ96D98 161 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 SCARF2Q96GP6 870 aaPredicted RBP13.92□□□□□ -0.18
GGA3-215ENST00000582821 WDR24Q96S15 920 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 CDH19Q9H159 772 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 ZFYVE1Q9HBF4 777 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 PKD2L2Q9NZM6 624 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 KLHL8Q9P2G9 620 aaPredicted RBP13.92□□□□□ -0.18
GGA3-215ENST00000582821 CD84Q9UIB8 345 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 GUCA1BQ9UMX6 200 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 PACSIN2Q9UNF0 486 aaPredicted RBP13.92□□□□□ -0.18
GGA3-215ENST00000582821 SLC17A4Q9Y2C5 497 aa13.92□□□□□ -0.18
GGA3-215ENST00000582821 CACNA1BQ00975 2339 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 PRSS38A1L453 326 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 GOLGA6L9A6NEM1 432 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 PMPCBO75439 489 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 FUCA1P04066 466 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 PROS1P07225 676 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 IVLP07476 585 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 CCDC175P0C221 793 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 WNT3AP56704 352 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 EIF3EP60228 445 aaKnown RBP13.91□□□□□ -0.18
GGA3-215ENST00000582821 KLF1Q13351 362 aaPredicted RBP13.91□□□□□ -0.18
GGA3-215ENST00000582821 GALNT3Q14435 633 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 PCSK7Q16549 785 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 HENMT1Q5T8I9 393 aaKnown RBP13.91□□□□□ -0.18
GGA3-215ENST00000582821 UNQ6494/PRO21346Q6UXR6 183 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 KDELC2Q7Z4H8 507 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 KDF1Q8NAX2 398 aaPredicted RBP13.91□□□□□ -0.18
GGA3-215ENST00000582821 GLMNQ92990 594 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 PDXPQ96GD0 296 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 OXNAD1Q96HP4 312 aaPredicted RBP13.91□□□□□ -0.18
GGA3-215ENST00000582821 COX14Q96I36 57 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 MRGPRX2Q96LB1 330 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 RIOK2Q9BVS4 552 aaKnown RBP13.91□□□□□ -0.18
GGA3-215ENST00000582821 FAM83DQ9H4H8 585 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 GRPEL1Q9HAV7 217 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 MRPL40Q9NQ50 206 aaKnown RBP13.91□□□□□ -0.18
GGA3-215ENST00000582821 RAD18Q9NS91 495 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 NFKBIL1Q9UBC1 381 aaPredicted RBP13.91□□□□□ -0.18
GGA3-215ENST00000582821 DMXL2Q8TDJ6 3036 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 ASPMQ8IZT6 3477 aa13.91□□□□□ -0.18
GGA3-215ENST00000582821 ZFC3H1O60293 1989 aaKnown RBP13.91□□□□□ -0.18
GGA3-215ENST00000582821 USP24Q9UPU5 2620 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 TMEM8BA6NDV4 472 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 C1QTNF9BB2RNN3 333 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 ANXA9O76027 345 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 CELA2BP08218 269 aaPredicted RBP13.9□□□□□ -0.18
GGA3-215ENST00000582821 C1QTNF9P0C862 333 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 RPIAP49247 311 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 DCDC1P59894 354 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 CCZ1BP86790 482 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 CCZ1P86791 482 aaPredicted RBP13.9□□□□□ -0.18
GGA3-215ENST00000582821 CAMK2BQ13554 666 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 NR0B2Q15466 257 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 CCDC157Q569K6 752 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 ITPRIPL1Q6GPH6 555 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 DARS2Q6PI48 645 aaKnown RBP13.9□□□□□ -0.18
GGA3-215ENST00000582821 OGFOD3Q6PK18 319 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 LYSMD3Q7Z3D4 306 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 SLC35F3Q8IY50 421 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 GPBAR1Q8TDU6 330 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 HIC2Q96JB3 615 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 AGAP2Q99490 1192 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 TMEM168Q9H0V1 697 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 GBA3Q9H227 469 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 TRABDQ9H4I3 376 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 C10orf88Q9H8K7 445 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 CYP4F12Q9HCS2 524 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 TRNAU1APQ9NX07 287 aaKnown RBP13.9□□□□□ -0.18
GGA3-215ENST00000582821 UBP1Q9NZI7 540 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 RSPH14Q9UHP6 348 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 CNOT6Q9ULM6 557 aaKnown RBP13.9□□□□□ -0.18
GGA3-215ENST00000582821 DOLKQ9UPQ8 538 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 ZNF711Q9Y462 761 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 APC2O95996 2303 aa13.9□□□□□ -0.18
GGA3-215ENST00000582821 FREM2Q5SZK8 3169 aa13.89□□□□□ -0.19
GGA3-215ENST00000582821 GOLGA6CA6NDK9 693 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms