RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-213	ENST00000581523	DNASE1L2	Q92874	299 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	SAAL1	Q96ER3	474 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	CALML4	Q96GE6	196 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	MAEL	Q96JY0	434 aa	Known RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	GCNA	Q96QF7	691 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	HIST1H2AA	Q96QV6	131 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	WDR24	Q96S15	920 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	TIPIN	Q9BVW5	301 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	TEX101	Q9BY14	249 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	FGFBP2	Q9BYJ0	223 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	PARVG	Q9HBI0	331 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	SEPSECS	Q9HD40	501 aa	Known RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	PARD6A	Q9NPB6	346 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	FSCN3	Q9NQT6	498 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	VPS45	Q9NRW7	570 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	BLOC1S4	Q9NUP1	217 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	TMEM74B	Q9NUR3	256 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	C2orf42	Q9NWW7	574 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	GTSE1	Q9NYZ3	720 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	GDE1	Q9NZC3	331 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	IFT80	Q9P2H3	777 aa	Predicted RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	LARS	Q9P2J5	1176 aa	Known RBP	4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	GMEB2	Q9UKD1	530 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	TBX20	Q9UMR3	447 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	SMC3	Q9UQE7	1217 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	CLIC4	Q9Y696	253 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	PIEZO1	Q92508	2521 aa		4.56	□□□□□ -1.68
MSI2-213	ENST00000581523	ZNF638	Q14966	1978 aa	Known RBP	4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	DNAH14	Q0VDD8	3507 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	KRTAP23-1	A1A580	65 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	GAGE12B	A1L429	117 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	GOLGA8IP	A6NC78	632 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	GAGE12H	A6NDE8	117 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	OR6C75	A6NL08	312 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	GOLGA8J	A6NMD2	632 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	MARCH11	A6NNE9	402 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	ANKRD63	C9JTQ0	380 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	SPECC1L-ADORA2A	F8WAN1	911 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523		H0YCG3	227 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523		M0QZQ0	153 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	AGPS	O00116	658 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	ZNF197	O14709	1029 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	SNX2	O60749	519 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	CBFA2T3	O75081	653 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	GCNT3	O95395	438 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	KRT19	P08727	400 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	CLTA	P09496	248 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	FAM163B	P0C2L3	166 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	ZSCAN22	P10073	491 aa	Predicted RBP	4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	ARSA	P15289	507 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	ACO1	P21399	889 aa	Known RBP	4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	CNTF	P26441	200 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	RBL1	P28749	1068 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	CASP2	P42575	452 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	CCR3	P51677	355 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	CXADR	P78310	365 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	TFAM	Q00059	246 aa	Known RBP	4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	BFSP1	Q12934	665 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	PDIA5	Q14554	519 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	CLCA4	Q14CN2	919 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	VEPH1	Q14D04	833 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	CD300E	Q496F6	205 aa	Predicted RBP	4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	PREPL	Q4J6C6	727 aa	Predicted RBP	4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	HYI	Q5T013	277 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	C9orf57	Q5W0N0	161 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	WSCD1	Q658N2	575 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	ADAL	Q6DHV7	355 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	RINL	Q6ZS11	566 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	LIMS2	Q7Z4I7	341 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	MAATS1	Q7Z4T9	603 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	ANKS1B	Q7Z6G8	1248 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	TTC30A	Q86WT1	665 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	ESX1	Q8N693	406 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	MAB21L3	Q8N8X9	362 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	SUN3	Q8TAQ9	357 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	CPT1C	Q8TCG5	803 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523		Q8TCH9	128 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	DEPDC1B	Q8WUY9	529 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	TMEM171	Q8WVE6	324 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	POMGNT1	Q8WZA1	660 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	LARP4B	Q92615	738 aa	Known RBP	4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	SECISBP2L	Q93073	1101 aa	Known RBP	4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	NACC2	Q96BF6	587 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	EPSTI1	Q96J88	318 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	SENP8	Q96LD8	212 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	LRRC3B	Q96PB8	259 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	KCNC2	Q96PR1	638 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	TRAPPC9	Q96Q05	1148 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	FAM213A	Q9BRX8	229 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	PI4K2A	Q9BTU6	479 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	KRTAP9-9	Q9BYP9	154 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	KRTAP9-4	Q9BYQ2	154 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	AMBRA1	Q9C0C7	1298 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	VPS16	Q9H269	839 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	EBF3	Q9H4W6	596 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	C17orf75	Q9HAS0	396 aa		4.55	□□□□□ -1.68
MSI2-213	ENST00000581523	LMAN1L	Q9HAT1	526 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms